RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 HCRTO43612 131 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 WDR44Q5JSH3 913 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 METTL23Q86XA0 190 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 INTS2Q9H0H0 1204 aaKnown RBP23.74■■□□□ 1.39
SHMT1-203ENST00000354098 GCNT4Q9P109 453 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 FBXL5Q9UKA1 691 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 CDY1Q9Y6F8 540 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 TSC2P49815 1807 aa23.74■■□□□ 1.39
SHMT1-203ENST00000354098 WEE2P0C1S8 567 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 SLC9A1P19634 815 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 NRIP1P48552 1158 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 APBA1Q02410 837 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 PDXDC1Q6P996 788 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 GAS2L3Q86XJ1 694 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 TMEM86AQ8N2M4 240 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 NIF3L1Q9GZT8 377 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 TLE6Q9H808 572 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.73■■□□□ 1.39
SHMT1-203ENST00000354098 FNIP2Q9P278 1114 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 BACE2Q9Y5Z0 518 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 H7C4K7 107 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 GABRDO14764 452 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 OR1D2P34982 312 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 ZNF280DQ6N043 979 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 GBP6Q6ZN66 633 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 OR10T2Q8NGX3 314 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 TMEM209Q96SK2 561 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 ARID3AQ99856 593 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 EMILIN2Q9BXX0 1053 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 DDX43Q9NXZ2 648 aaKnown RBP23.73■■□□□ 1.39
SHMT1-203ENST00000354098 NME7Q9Y5B8 376 aa23.73■■□□□ 1.39
SHMT1-203ENST00000354098 REV3LO60673 3130 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 GTPBP10A4D1E9 387 aaKnown RBP23.72■■□□□ 1.39
SHMT1-203ENST00000354098 CLASP2O75122 1294 aaKnown RBP23.72■■□□□ 1.39
SHMT1-203ENST00000354098 TACC1O75410 805 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 TPM2P07951 284 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 P4HA1P13674 534 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 LMO2P25791 158 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 KLRC2P26717 231 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 TPM4P67936 248 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 KCNMA1Q12791 1236 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 HYAL1Q12794 435 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 EXOC3L4Q17RC7 722 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 BCO2Q9BYV7 579 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 IGFLR1Q9H665 355 aa23.72■■□□□ 1.39
SHMT1-203ENST00000354098 OR4Q2P0C623 313 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 WARSP23381 471 aaKnown RBP23.71■■□□□ 1.39
SHMT1-203ENST00000354098 ACAT1P24752 427 aaKnown RBP23.71■■□□□ 1.39
SHMT1-203ENST00000354098 PON1P27169 355 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 NDUFV1P49821 464 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 ARPP19P56211 112 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 RBM10P98175 930 aaKnown RBP23.71■■□□□ 1.39
SHMT1-203ENST00000354098 CCDC85BQ15834 202 aaPredicted RBP23.71■■□□□ 1.39
SHMT1-203ENST00000354098 SLC8B1Q6J4K2 584 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 TRIM65Q6PJ69 517 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 PALB2Q86YC2 1186 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 ARHGEF19Q8IW93 802 aa23.71■■□□□ 1.39
SHMT1-203ENST00000354098 CDR1P51861 262 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 CREMQ03060 361 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 DUSP6Q16828 381 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 PHLDB3Q6NSJ2 640 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 THEM5Q8N1Q8 247 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 OR6B3Q8NGW1 331 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 NAP1L5Q96NT1 182 aaPredicted RBP23.7■■□□□ 1.39
SHMT1-203ENST00000354098 NT5C1BQ96P26 610 aa23.7■■□□□ 1.39
SHMT1-203ENST00000354098 LGALS16A8MUM7 142 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 PDGFRBP09619 1106 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 GNL1P36915 607 aaPredicted RBP23.7■■□□□ 1.38
SHMT1-203ENST00000354098 LHX1P48742 406 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 CUL2Q13617 745 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 RRAGAQ7L523 313 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 KAT5Q92993 513 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 RBSNQ9H1K0 784 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 SNX25Q9H3E2 840 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 STXBP5LQ9Y2K9 1186 aa23.7■■□□□ 1.38
SHMT1-203ENST00000354098 EYSQ5T1H1 3165 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 SERPINC1P01008 464 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 ADH1AP07327 375 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 FAM163BP0C2L3 166 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 SPATA31D3P0C874 917 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 CD58P19256 250 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 CLCN4P51793 760 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 FANCCQ00597 558 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 ROR1Q01973 937 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 DPY19L2P1Q6NXN4 242 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 GJB7Q6PEY0 223 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 SPATA31D4Q6ZUB0 917 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 PPM1KQ8N3J5 372 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 SPATA18Q8TC71 538 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 PPM1EQ8WY54 764 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 PPP2R3CQ969Q6 453 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 SIX2Q9NPC8 291 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 HMGXB4Q9UGU5 601 aa23.69■■□□□ 1.38
SHMT1-203ENST00000354098 WDR27A2RRH5 827 aa23.68■■□□□ 1.38
SHMT1-203ENST00000354098 OR6C75A6NL08 312 aa23.68■■□□□ 1.38
SHMT1-203ENST00000354098 LINC01565O15544 149 aa23.68■■□□□ 1.38
SHMT1-203ENST00000354098 TEX33O43247 280 aa23.68■■□□□ 1.38
SHMT1-203ENST00000354098 ATP2C2O75185 946 aa23.68■■□□□ 1.38
SHMT1-203ENST00000354098 KLK7P49862 253 aa23.68■■□□□ 1.38
SHMT1-203ENST00000354098 UBXN1Q04323 297 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms