RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 UBAP2Q5T6F2 1119 aaKnown RBP1.9□□□□□ -2.11
BRCA1-202ENST00000354071 VASNQ6EMK4 673 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 GALNT18Q6P9A2 607 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 ETV3LQ6ZN32 361 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 KIAA0408Q6ZU52 694 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 MIB1Q86YT6 1006 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 TRIM48Q8IWZ4 208 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 PCYOX1LQ8NBM8 494 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 NETO2Q8NC67 525 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 TMIEQ8NEW7 156 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 TTLL11Q8NHH1 800 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 BRIX1Q8TDN6 353 aaKnown RBP1.9□□□□□ -2.11
BRCA1-202ENST00000354071 ADAMTS18Q8TE60 1221 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 NMD3Q96D46 503 aaKnown RBP1.9□□□□□ -2.11
BRCA1-202ENST00000354071 ZBTB10Q96DT7 871 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 NOX5Q96PH1 765 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 GPR20Q99678 358 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 VKORC1Q9BQB6 163 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 PYM1Q9BRP8 204 aaKnown RBP1.9□□□□□ -2.11
BRCA1-202ENST00000354071 SENP6Q9GZR1 1112 aaPredicted RBP1.9□□□□□ -2.11
BRCA1-202ENST00000354071 TLR8Q9NR97 1041 aaKnown RBP1.9□□□□□ -2.11
BRCA1-202ENST00000354071 FBXO34Q9NWN3 711 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 RGL1Q9NZL6 768 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 ARHGAP26Q9UNA1 814 aa1.9□□□□□ -2.11
BRCA1-202ENST00000354071 C2orf78A6NCI8 922 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 GOLGA6L3A6NEY3 463 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF785A8K8V0 405 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 IFNL4K9M1U5 179 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SPTLC2O15270 562 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SOAT2O75908 522 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 KIF20AO95235 890 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ATF2P15336 505 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SLC6A2P23975 617 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 AKT1P31749 480 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CHRNA2Q15822 529 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FAM214AQ32MH5 1076 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZIK1Q3SY52 487 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ICE2Q659A1 982 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 RFX8Q6ZV50 586 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 BMP8AQ7Z5Y6 402 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 VGLL2Q8N8G2 317 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 OTUD7AQ8TE49 926 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 WDR92Q96MX6 357 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FMNL2Q96PY5 1086 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 NACC1Q96RE7 527 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PRPF18Q99633 342 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PDGFDQ9GZP0 370 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 KCNH6Q9H252 994 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ANKEF1Q9NU02 776 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SPATA6Q9NWH7 488 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 KLHL14Q9P2G3 628 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CROTQ9UKG9 612 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FAM184BQ9ULE4 1060 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZMYND8Q9ULU4 1186 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CNPY2Q9Y2B0 182 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ATP11BQ9Y2G3 1177 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 RBM8AQ9Y5S9 174 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MAGED1Q9Y5V3 778 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 USP32Q8NFA0 1604 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 M0QYG6 137 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SLC16A6O15403 523 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SGTAO43765 313 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TUBB4AP04350 444 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CYBBP04839 570 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ZSCAN22P10073 491 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 RAP2AP10114 183 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ALOX15P16050 662 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 KRT20P35900 424 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 RGS2P41220 211 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 EIF5P55010 431 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MLLT6P55198 1093 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ITGA1P56199 1179 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ARL4CP56559 192 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PRKCQQ04759 706 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CACNB2Q08289 660 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 DUSP8Q13202 625 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MAPKAPK3Q16644 382 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TBR1Q16650 682 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FCRL6Q6DN72 434 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 GRAMD4Q6IC98 578 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MZT2BQ6NZ67 158 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PAQR3Q6TCH7 311 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 SYNE3Q6ZMZ3 975 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CCDC28AQ8IWP9 274 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 GALNT4Q8N4A0 578 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ANKS4BQ8N8V4 417 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FANCBQ8NB91 859 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 OR6B3Q8NGW1 331 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 CALML6Q8TD86 181 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 GORASP1Q9BQQ3 440 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 COLEC11Q9BWP8 271 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 BTBD2Q9BX70 525 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 PCGF6Q9BYE7 350 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 TMEM160Q9NX00 188 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 RCE1Q9Y256 329 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MRPS17Q9Y2R5 130 aaKnown RBP1.89□□□□□ -2.11
BRCA1-202ENST00000354071 MED16Q9Y2X0 877 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 FITM1A5D6W6 292 aa1.89□□□□□ -2.11
BRCA1-202ENST00000354071 KRTAP9-7A8MTY7 169 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms