RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DNAJC8O75937 253 aaPredicted RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 ALDH1A1P00352 501 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 FTLP02792 175 aaPredicted RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 MYL3P08590 195 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 SLCO1A2P46721 670 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 SNRPFP62306 86 aaKnown RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 PURAQ00577 322 aaKnown RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 MYL7Q01449 175 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 STRN3Q13033 797 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 EPC2Q52LR7 807 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 CCDC137Q6PK04 289 aaKnown RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 INTS8Q75QN2 995 aaKnown RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 RHOT2Q8IXI1 618 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 LRRC34Q8IZ02 419 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 EPS8L3Q8TE67 593 aaKnown RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 TCP11Q8WWU5 503 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 SCLT1Q96NL6 688 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 AGPAT1Q99943 283 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 INO80BQ9C086 356 aaPredicted RBP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 CXCL16Q9H2A7 254 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.15□□□□□ -0.95
TRIM55-204ENST00000353317 CTTNBP2NLQ9P2B4 639 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 PCYOX1Q9UHG3 505 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 MCM8Q9UJA3 840 aa9.15□□□□□ -0.95
TRIM55-204ENST00000353317 CNTNAP2Q9UHC6 1331 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 TCRBV7S2A1N4TA0A589 114 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 ASAP2O43150 1006 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PRKCBP05771 671 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 DLATP10515 647 aaKnown RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PROZP22891 400 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 CTNNA2P26232 953 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 CHRNA3P32297 505 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PEX5P50542 639 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 HADHBP55084 474 aaKnown RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 MFSD10Q14728 455 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 FSCN1Q16658 493 aaKnown RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 KIZQ2M2Z5 673 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 ANKS4BQ8N8V4 417 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 TAS1R2Q8TE23 839 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 CPB2Q96IY4 423 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 FAM49AQ9H0Q0 323 aaPredicted RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 INTS9Q9NV88 658 aaKnown RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 RASAL2Q9UJF2 1139 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 AKT3Q9Y243 479 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PPME1Q9Y570 386 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 TMEM110-MUSTN1A8MSY1 372 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 GPR25O00155 361 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 MAPK13O15264 365 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 C6orf222P0C671 652 aaPredicted RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PYGMP11217 842 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 AKR1A1P14550 325 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 PSEN2P49810 448 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 GPC3P51654 580 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 ELF3P78545 371 aaPredicted RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 TNFAIP8L3Q5GJ75 292 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 C11orf63Q6NUN7 778 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 CXCL17Q6UXB2 119 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 C15orf39Q6ZRI6 1047 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 SV2AQ7L0J3 742 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 TAX1BP1Q86VP1 789 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 UBL4BQ8N7F7 174 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 OR5B17Q8NGF7 314 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 TMEM40Q8WWA1 233 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 WNT8BQ93098 351 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 ZSWIM1Q9BR11 485 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 MSTO1Q9BUK6 570 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 ADAMTS10Q9H324 1103 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 UBE2TQ9NPD8 197 aaPredicted RBP9.14□□□□□ -0.95
TRIM55-204ENST00000353317 ACP6Q9NPH0 428 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 SLC12A4Q9UP95 1085 aa9.14□□□□□ -0.95
TRIM55-204ENST00000353317 CITO14578 2027 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 LAMA2P24043 3122 aaKnown RBP9.13□□□□□ -0.95
TRIM55-204ENST00000353317 MBLAC1A4D2B0 266 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-204ENST00000353317 MIF4GDA9UHW6 222 aaKnown RBP9.13□□□□□ -0.95
TRIM55-204ENST00000353317 ACKR2O00590 384 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 PODXLO00592 558 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 RIPK2O43353 540 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 GAS2O43903 313 aaKnown RBP9.13□□□□□ -0.95
TRIM55-204ENST00000353317 EXTL3O43909 919 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 GPR32O75388 356 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 VNN1O95497 513 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 AGTP01019 485 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 CALCAP01258 141 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 COMTP21964 271 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 IFNAR2P48551 515 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 OSTNP61366 133 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 ADCY2Q08462 1091 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 IRF5Q13568 498 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 ITIH4Q14624 930 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 E2F5Q15329 346 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 PPP1R7Q15435 360 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 CLUL1Q15846 466 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 MAPK6Q16659 721 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 CCDC38Q502W7 563 aa9.13□□□□□ -0.95
TRIM55-204ENST00000353317 HIBCHQ6NVY1 386 aaPredicted RBP9.13□□□□□ -0.95
TRIM55-204ENST00000353317 RPAINQ86UA6 219 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms