RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 YIPF1Q9Y548 306 aa15.58■□□□□ 0.08
HMGN3-202ENST00000344726 DENND4CQ5VZ89 1909 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 OR6C75A6NL08 312 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 CYB561D2O14569 222 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 CLIC2O15247 247 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 ITGB3P05106 788 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
HMGN3-202ENST00000344726 PTPN2P17706 415 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 PAX3P23760 479 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 FCARP24071 287 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 POLR2BP30876 1174 aaKnown RBP15.57■□□□□ 0.08
HMGN3-202ENST00000344726 CDR1P51861 262 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 NDUFA8P51970 172 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 GPR17Q13304 367 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 BMT2Q1RMZ1 405 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 KIAA0895Q8NCT3 520 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 OXCT2Q9BYC2 517 aaPredicted RBP15.57■□□□□ 0.08
HMGN3-202ENST00000344726 MTMR12Q9C0I1 747 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 DNAJC25Q9H1X3 360 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 GOLPH3LQ9H4A5 285 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 SIX4Q9UIU6 781 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 UBE4BO95155 1302 aa15.57■□□□□ 0.08
HMGN3-202ENST00000344726 MTMR11A4FU01 709 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 KPNA7A9QM74 516 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 KIAA0391O15091 583 aaKnown RBP15.56■□□□□ 0.08
HMGN3-202ENST00000344726 STK4Q13043 487 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 MYBPC2Q14324 1141 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 WSCD1Q658N2 575 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 OR5B17Q8NGF7 314 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 ZSWIM3Q96MP5 696 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 LRRC3Q9BY71 257 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 SCAND2PQ9GZW5 306 aaPredicted RBP15.56■□□□□ 0.08
HMGN3-202ENST00000344726 TBC1D17Q9HA65 648 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 ARHGEF3Q9NR81 526 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 MAFFQ9ULX9 164 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 AGAP1Q9UPQ3 857 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 NCANO14594 1321 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 COL4A2P08572 1712 aa15.56■□□□□ 0.08
HMGN3-202ENST00000344726 ZNF233A6NK53 670 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 SOAT2O75908 522 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 GJA1P17302 382 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 CYP2J2P51589 502 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 NUBP1P53384 320 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 DUSP4Q13115 394 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 BECN1Q14457 450 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 SV2CQ496J9 727 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 KMT5BQ4FZB7 885 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 TANGO2Q6ICL3 276 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 MTSS1LQ765P7 747 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 TMC8Q8IU68 726 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 CCDC105Q8IYK2 499 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 CSGALNACT2Q8N6G5 542 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 RDH13Q8NBN7 331 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 ATAD1Q8NBU5 361 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
HMGN3-202ENST00000344726 ZNF560Q96MR9 790 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 GZF1Q9H116 711 aaPredicted RBP15.55■□□□□ 0.08
HMGN3-202ENST00000344726 INTS13Q9NVM9 706 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 ITGA11Q9UKX5 1188 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 SLC27A5Q9Y2P5 690 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 ATP6V1DQ9Y5K8 247 aa15.55■□□□□ 0.08
HMGN3-202ENST00000344726 A0A1W2PQ27 194 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 A0A1W2PQ64 194 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 A0A1W2PQD8 194 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 LRRN2O75325 713 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 PNPLA4P41247 253 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 SYKP43405 635 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 EPHA5P54756 1037 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 SNRNP35Q16560 246 aaKnown RBP15.54■□□□□ 0.08
HMGN3-202ENST00000344726 KNOP1Q1ED39 458 aaKnown RBP15.54■□□□□ 0.08
HMGN3-202ENST00000344726 SLC39A12Q504Y0 691 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 FAM78AQ5JUQ0 283 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 PDZD4Q76G19 769 aaPredicted RBP15.54■□□□□ 0.08
HMGN3-202ENST00000344726 LRRTM3Q86VH5 581 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 LRRC52Q8N7C0 313 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 ATOH1Q92858 354 aaPredicted RBP15.54■□□□□ 0.08
HMGN3-202ENST00000344726 ZCWPW1Q9H0M4 648 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 EXOC1Q9NV70 894 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 GDE1Q9NZC3 331 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 DLGAP2Q9P1A6 1054 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 USP25Q9UHP3 1055 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 DSEQ9UL01 958 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 L1RE1Q9UN81 338 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 PTPRDP23468 1912 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 OBSL1O75147 1896 aa15.54■□□□□ 0.08
HMGN3-202ENST00000344726 SHISA7A6NL88 538 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 ECI2O75521 394 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 KRT19P08727 400 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 GLULP15104 373 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 SNRPFP62306 86 aaKnown RBP15.53■□□□□ 0.08
HMGN3-202ENST00000344726 BFSP1Q12934 665 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 SNW1Q13573 536 aaKnown RBP15.53■□□□□ 0.08
HMGN3-202ENST00000344726 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 METTL23Q86XA0 190 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 C12orf56Q8IXR9 622 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 XXYLT1Q8NBI6 393 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms