RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 BMP8BP34820 402 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 NSFP46459 744 aaKnown RBP8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TUFMP49411 452 aaKnown RBP8.68□□□□□ -1.02
HMGCR-202ENST00000343975 PLD1Q13393 1074 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 NR1I3Q14994 352 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TIGD5Q53EQ6 642 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TRIM72Q6ZMU5 477 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TCF25Q9BQ70 676 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TLR9Q9NR96 1032 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 MIOSQ9NXC5 875 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 ABI2Q9NYB9 513 aaPredicted RBP8.68□□□□□ -1.02
HMGCR-202ENST00000343975 DNAJB4Q9UDY4 337 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TMEM189-UBE2V1I3L0A0 370 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 DDHD2O94830 711 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
HMGCR-202ENST00000343975 FAM200BP0CF97 657 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 VDRP11473 427 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 SOX5P35711 763 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 PBX3P40426 434 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 EPHB4P54760 987 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 IFRD2Q12894 506 aaPredicted RBP8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TAF3Q5VWG9 929 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 CYP26C1Q6V0L0 522 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 IRF2BP1Q8IU81 584 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 TMTC1Q8IUR5 882 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 KLHL23Q8NBE8 558 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 SEPT5Q99719 369 aaPredicted RBP8.68□□□□□ -1.02
HMGCR-202ENST00000343975 OSBPL7Q9BZF2 842 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 ITIH6Q6UXX5 1313 aa8.68□□□□□ -1.02
HMGCR-202ENST00000343975 GLUD1P00367 558 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 ADORA2BP29275 332 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CDC25BP30305 580 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CASP14P31944 242 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 GRIK1P39086 918 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 SMAD3P84022 425 aaKnown RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 UPP1Q16831 310 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 EPC2Q52LR7 807 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 XKR4Q5GH76 650 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 VARS2Q5ST30 1063 aaKnown RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 SLC39A11Q8N1S5 342 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 POF1BQ8WVV4 589 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 TMEM176AQ96HP8 235 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 ELOVL4Q9GZR5 314 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 GRXCR1A8MXD5 290 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 M0QYV0 167 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 PIRO00625 290 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 SART1O43290 800 aaKnown RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CST3P01034 146 aaPredicted RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 NDST1P52848 882 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 KRT83P78385 493 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 FIGNQ5HY92 759 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 ACOT1Q86TX2 421 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 TATDN2Q93075 761 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 NAA15Q9BXJ9 866 aaKnown RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CYP4F11Q9HBI6 524 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 GDAP2Q9NXN4 497 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 LINC01553A4QN01 128 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 XYLBO75191 536 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 ABL1P00519 1130 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 PAEPP09466 180 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 NDUFV1P49821 464 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 EPHB3P54753 998 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 DSC1Q08554 894 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 IFI16Q16666 785 aaKnown RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CCDC186Q7Z3E2 898 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 DDX53Q86TM3 631 aaKnown RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 ITIH5Q86UX2 942 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 ZNF677Q86XU0 584 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 SPPL2BQ8TCT7 592 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CTNNBL1Q8WYA6 563 aaPredicted RBP8.67□□□□□ -1.02
HMGCR-202ENST00000343975 TRIM62Q9BVG3 475 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 SMYD3Q9H7B4 428 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 FAM49BQ9NUQ9 324 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
HMGCR-202ENST00000343975 CAPN9O14815 690 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 TACC1O75410 805 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 SERPING1P05155 500 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 OR1D2P34982 312 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 CDH8P55286 799 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 RSRC2Q7L4I2 434 aaKnown RBP8.66□□□□□ -1.02
HMGCR-202ENST00000343975 CYFIP2Q96F07 1278 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-202ENST00000343975 LZTS1Q9Y250 596 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 ARID2Q68CP9 1835 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 CYP26A1O43174 497 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 RAP1GAPP47736 663 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 RGS19P49795 217 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 HTRA4P83105 476 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-202ENST00000343975 SOX4Q06945 474 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-202ENST00000343975 MDH1BQ5I0G3 518 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 MIIPQ5JXC2 388 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 PPM1LQ5SGD2 360 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 SMYD5Q6GMV2 418 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 ALKAL1Q6UXT8 129 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 ZNF516Q92618 1163 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 ACBD6Q9BR61 282 aa8.66□□□□□ -1.02
HMGCR-202ENST00000343975 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms