RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
SP140-201ENST00000343805 HEY1Q9Y5J3 304 aa9.24□□□□□ -0.93
SP140-201ENST00000343805 MYH7BA7E2Y1 1941 aa9.24□□□□□ -0.93
SP140-201ENST00000343805 COL5A3P25940 1745 aaPredicted RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 NRAPQ86VF7 1730 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 SMCHD1A6NHR9 2005 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 A0A0B4J203 849 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 F5H6K3 240 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 DDX39AO00148 427 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 EIF1AYO14602 144 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 AKAP3O75969 853 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 LCA5LO95447 670 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 GNA14O95837 355 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 MYBL1P10243 752 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 NPR3P17342 541 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 CRKP46108 304 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 KLRC3Q07444 240 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 MCL1Q07820 350 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 HSPA14Q0VDF9 509 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 LLGL1Q15334 1064 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 FIP1L1Q6UN15 594 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 RUFY4Q6ZNE9 571 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 ARHGEF18Q6ZSZ5 1173 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 FAM186BQ8IYM0 893 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 CFAP61Q8NHU2 1237 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 ERP27Q96DN0 273 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 C1orf74Q96LT6 269 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 KCTD10Q9H3F6 313 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 QTRT2Q9H974 415 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 PPCSQ9HAB8 311 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 FAIMQ9NVQ4 179 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 EURLQ9NYK6 297 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 CHORDC1Q9UHD1 332 aaPredicted RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 AJAP1Q9UKB5 411 aaPredicted RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 SCAF8Q9UPN6 1271 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 GRID2IPA4D2P6 1211 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 MEIS2O14770 477 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 RAD51CO43502 376 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 KCNJ13O60928 360 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 UCHL3P15374 230 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 NMT1P30419 496 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 EPHB4P54760 987 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 DR1Q01658 176 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 ARL13BQ3SXY8 428 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 TTMPQ5BVD1 217 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 TTC39BQ5VTQ0 682 aaPredicted RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 TWF2Q6IBS0 349 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 ZCCHC8Q6NZY4 707 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 ALKBH5Q6P6C2 394 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 CCDC174Q6PII3 467 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 CCDC63Q8NA47 563 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 U2AF1L4Q8WU68 220 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 GFM2Q969S9 779 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 PRPF18Q99633 342 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 RUSC1Q9BVN2 902 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 IP6K2Q9UHH9 426 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
SP140-201ENST00000343805 SLC12A4Q9UP95 1085 aa9.23□□□□□ -0.93
SP140-201ENST00000343805 SPATA31A6Q5VVP1 1343 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 KDM3AQ9Y4C1 1321 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 SSU72P8A0A1W2PR75 194 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 SPECC1L-ADORA2AF8WAN1 911 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 STRNO43815 780 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 CYP2C9P11712 490 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 TUFMP49411 452 aaKnown RBP9.22□□□□□ -0.93
SP140-201ENST00000343805 CYP2J2P51589 502 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 GUCY1A3Q02108 690 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 NNTQ13423 1086 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 GIT2Q14161 759 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 PPP1R7Q15435 360 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 NAB2Q15742 525 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 ARHGAP44Q17R89 818 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 SLC27A3Q5K4L6 730 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 WDR45BQ5MNZ6 344 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 C16orf46Q6P387 395 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 SPATC1Q76KD6 591 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 KRT27Q7Z3Y8 459 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 ZNF598Q86UK7 904 aaKnown RBP9.22□□□□□ -0.93
SP140-201ENST00000343805 TMEM151BQ8IW70 566 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 IFT20Q8IY31 132 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 MYCT1Q8N699 235 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 ASIC4Q96FT7 647 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 B3GNT4Q9C0J1 378 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 PDGFDQ9GZP0 370 aaPredicted RBP9.22□□□□□ -0.93
SP140-201ENST00000343805 VPS33BQ9H267 617 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 TDRD3Q9H7E2 651 aaKnown RBP9.22□□□□□ -0.93
SP140-201ENST00000343805 KRT82Q9NSB4 513 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 UBP1Q9NZI7 540 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.22□□□□□ -0.93
SP140-201ENST00000343805 PCDHGB3Q9Y5G1 929 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 PCDHA2Q9Y5H9 948 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 IGKV6D-41A0A0C4DH26 115 aa9.22□□□□□ -0.93
SP140-201ENST00000343805 hCG_1984214I3L0E3 225 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms