RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TMC5Q6UXY8 1006 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SV2AQ7L0J3 742 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FILIP1Q7Z7B0 1213 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PDCL2Q8N4E4 241 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 C12orf76Q8N812 135 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 RTP3Q9BQQ7 232 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 METTL14Q9HCE5 456 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 USTQ9Y2C2 406 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SNX9Q9Y5X1 595 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TTC28Q96AY4 2481 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PHACTR2O75167 634 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 XYLBO75191 536 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 RFPL2O75678 378 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SPATA31D3P0C874 917 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CPB1P15086 417 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ELF1P32519 619 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 BIRC3Q13489 604 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 NCOA4Q13772 614 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SGSM1Q2NKQ1 1148 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PPM1LQ5SGD2 360 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SCARA3Q6AZY7 606 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 RBM43Q6ZSC3 357 aaKnown RBP14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SPATA31D4Q6ZUB0 917 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FRMD5Q7Z6J6 570 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 OR10T2Q8NGX3 314 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GPT2Q8TD30 523 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 NELFBQ8WX92 580 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FAXDC2Q96IV6 333 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 DUSP9Q99956 384 aaKnown RBP14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 COL25A1Q9BXS0 654 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TMEM8AQ9HCN3 771 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 WDR6Q9NNW5 1121 aaKnown RBP14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 RWDD2AQ9UIY3 292 aa14.04□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TRIM49BA6NDI0 452 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 LOC730098B7Z3J9 87 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TULP1O00294 542 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 VNN1O95497 513 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GNA14O95837 355 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 WARSP23381 471 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PCSK1P29120 753 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MARSP56192 900 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MYL6P60660 151 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MYL7Q01449 175 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 WDR72Q3MJ13 1102 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 KRT39Q6A163 491 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 DCP1BQ8IZD4 617 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ADGRF2Q8IZF7 708 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SLC7A14Q8TBB6 771 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 AVENQ9NQS1 362 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ARMCX3Q9UH62 379 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 NR2E1Q9Y466 385 aa14.03□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PMM2O15305 246 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FGFR1OPO95684 399 aaKnown RBP14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ASS1P00966 412 aaKnown RBP14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 P4HA1P13674 534 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ARPP19P56211 112 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TNNC1P63316 161 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PPP3CAQ08209 521 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ADCY1Q08828 1119 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PLD1Q13393 1074 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 NFE2Q16621 373 aaPredicted RBP14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZNF699Q32M78 642 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 RNF19BQ6ZMZ0 732 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GJD3Q8N144 294 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SPPL2BQ8TCT7 592 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 KBTBD7Q8WVZ9 684 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 APOL5Q9BWW9 433 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 POMKQ9H5K3 350 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FAM124BQ9H5Z6 455 aaPredicted RBP14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CYP4F11Q9HBI6 524 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 DDX43Q9NXZ2 648 aaKnown RBP14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 DACH1Q9UI36 760 aa14.02□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MTMR11A4FU01 709 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 PRRG1O14668 218 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SEC24AO95486 1093 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 VNN2O95498 520 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ERCC5P28715 1186 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TSPY1Q01534 308 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ZNF667Q5HYK9 610 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 KLHL10Q6JEL2 608 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 EEF2KMTQ96G04 330 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 IMPG2Q9BZV3 1241 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 ABCB6Q9NP58 842 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 COQ4Q9Y3A0 265 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 INSL5Q9Y5Q6 135 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 MUC3AQ02505 3323 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 SCN1AP35498 2009 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 CLUHO75153 1309 aa14.01□□□□□ -0.17
HLA-DQA1-201ENST00000343139 LRG1P02750 347 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TRIM49P0CI25 452 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TRIM49CP0CI26 452 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 GCLMP48507 274 aa14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 TUFMP49411 452 aaKnown RBP14□□□□□ -0.17
HLA-DQA1-201ENST00000343139 NLRP12P59046 1061 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms