RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SURF1Q15526 300 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 DUOXA2Q1HG44 320 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 PLCD3Q8N3E9 789 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 ITFG1Q8TB96 612 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 CCDC127Q96BQ5 260 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 ACSF2Q96CM8 615 aaPredicted RBP16.44■□□□□ 0.22
PRKN-201ENST00000338468 ANKRD36BP1Q96IX9 119 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 CGRRF1Q99675 332 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 SMOC2Q9H3U7 446 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 MAFFQ9ULX9 164 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 L1RE1Q9UN81 338 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 POLIQ9UNA4 740 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 SORCS3Q9UPU3 1222 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 INSL5Q9Y5Q6 135 aa16.44■□□□□ 0.22
PRKN-201ENST00000338468 PTPRZ1P23471 2315 aaPredicted RBP16.44■□□□□ 0.22
PRKN-201ENST00000338468 PRRG1O14668 218 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 EXOC3O60645 756 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 KRT19P08727 400 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
PRKN-201ENST00000338468 FSHRP23945 695 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 ELF1P32519 619 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 CASP4P49662 377 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 BFSP1Q12934 665 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 POTEHQ6S545 545 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 GET4Q7L5D6 327 aaPredicted RBP16.43■□□□□ 0.22
PRKN-201ENST00000338468 TRAPPC11Q7Z392 1133 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 LIMS2Q7Z4I7 341 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 LRRTM3Q86VH5 581 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 GUF1Q8N442 669 aaKnown RBP16.43■□□□□ 0.22
PRKN-201ENST00000338468 PDCL2Q8N4E4 241 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 SPATA20Q8TB22 786 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 ZCWPW1Q9H0M4 648 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 GDAP2Q9NXN4 497 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 DSEQ9UL01 958 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 TRAF3IP3Q9Y228 551 aa16.43■□□□□ 0.22
PRKN-201ENST00000338468 MTMR11A4FU01 709 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 NRG2O14511 850 aaPredicted RBP16.42■□□□□ 0.22
PRKN-201ENST00000338468 CST3P01034 146 aaPredicted RBP16.42■□□□□ 0.22
PRKN-201ENST00000338468 TNNC2P02585 160 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 NR3C1P04150 777 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
PRKN-201ENST00000338468 CLDN10P78369 228 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 SLC5A9Q2M3M2 681 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 ZCWPW2Q504Y3 356 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 CENPPQ6IPU0 288 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 SMYD4Q8IYR2 804 aaPredicted RBP16.42■□□□□ 0.22
PRKN-201ENST00000338468 TTC9BQ8N6N2 239 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 ATAD1Q8NBU5 361 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 ERCC4Q92889 916 aaPredicted RBP16.42■□□□□ 0.22
PRKN-201ENST00000338468 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
PRKN-201ENST00000338468 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 KCNK12Q9HB15 430 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
PRKN-201ENST00000338468 CEP72Q9P209 647 aa16.42■□□□□ 0.22
PRKN-201ENST00000338468 RIF1Q5UIP0 2472 aaKnown RBP16.41■□□□□ 0.22
PRKN-201ENST00000338468 PRR23AA6NEV1 266 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 LRG1P02750 347 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 RHOP08100 348 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 LAMP2P13473 410 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 TNNI1P19237 187 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 NBL1P41271 181 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 CDR1P51861 262 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 TWF1Q12792 350 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 DUSP4Q13115 394 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 NFIL3Q16649 462 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 PABPC1LQ4VXU2 614 aaKnown RBP16.41■□□□□ 0.22
PRKN-201ENST00000338468 ASCL5Q7RTU5 278 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 METTL23Q86XA0 190 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 RSAD2Q8WXG1 361 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 FNBP1Q96RU3 617 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 DNAJC25Q9H1X3 360 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 AVENQ9NQS1 362 aaPredicted RBP16.41■□□□□ 0.22
PRKN-201ENST00000338468 CHMP5Q9NZZ3 219 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 SLC27A5Q9Y2P5 690 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 YIPF1Q9Y548 306 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 SNX9Q9Y5X1 595 aa16.41■□□□□ 0.22
PRKN-201ENST00000338468 LRRIQ3A6PVS8 624 aaPredicted RBP16.4■□□□□ 0.22
PRKN-201ENST00000338468 ANHXE9PGG2 379 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 GABRDO14764 452 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 HCRTO43612 131 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
PRKN-201ENST00000338468 CCR2P41597 374 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 DLG4P78352 724 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 SOWAHAQ2M3V2 549 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 SLC39A12Q504Y0 691 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 PRSS36Q5K4E3 855 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 C1orf220Q5T0J3 134 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 TMEM105Q8N8V8 129 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 FGF13Q92913 245 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 PKMYT1Q99640 499 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 CDH7Q9ULB5 785 aa16.4■□□□□ 0.22
PRKN-201ENST00000338468 PCDHA5Q9Y5H7 936 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms