RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 TAP1Q03518 808 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 MKRN4PQ13434 485 aaPredicted RBP21.02■□□□□ 0.95
SOX2-201ENST00000325404 P3H1Q32P28 736 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 GSTA5Q7RTV2 222 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 TBC1D1Q86TI0 1168 aaPredicted RBP21.02■□□□□ 0.95
SOX2-201ENST00000325404 CEP57Q86XR8 500 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 SLITRK1Q96PX8 696 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 PHACTR1Q9C0D0 580 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 ARHGEF3Q9NR81 526 aa21.02■□□□□ 0.95
SOX2-201ENST00000325404 DNAJC17Q9NVM6 304 aaKnown RBP21.02■□□□□ 0.95
SOX2-201ENST00000325404 SIP14410 1827 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 A0A0B4J269 797 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 SPDYE16A6NNV3 312 aaPredicted RBP21.01■□□□□ 0.95
SOX2-201ENST00000325404 VPS41P49754 854 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 MORF4L2Q15014 288 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 GNPTABQ3T906 1256 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 PHLDB2Q86SQ0 1253 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 SRRM1Q8IYB3 904 aaKnown RBP21.01■□□□□ 0.95
SOX2-201ENST00000325404 ALLCQ8N6M5 410 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 L3MBTL3Q96JM7 780 aaPredicted RBP21.01■□□□□ 0.95
SOX2-201ENST00000325404 TMEM134Q9H6X4 195 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 PTPRJQ12913 1337 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 GSTTP1A0A1W2PQM5 241 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 RASA4BC9J798 803 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 RASA4O43374 803 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 GH1P01241 217 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 ARL2P36404 184 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 WNT7BP56706 349 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 GRM1Q13255 1194 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 LMBRD2Q68DH5 695 aaPredicted RBP21.01■□□□□ 0.95
SOX2-201ENST00000325404 SPOPLQ6IQ16 392 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 ASRGL1Q7L266 308 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 TRABD2AQ86V40 505 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 GIMAP7Q8NHV1 300 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 TCP11Q8WWU5 503 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 C9orf72Q96LT7 481 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 PWWP2AQ96N64 755 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 ZNF518BQ9C0D4 1074 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 DHX33Q9H6R0 707 aaKnown RBP21.01■□□□□ 0.95
SOX2-201ENST00000325404 SMG5Q9UPR3 1016 aaKnown RBP21.01■□□□□ 0.95
SOX2-201ENST00000325404 STARD13Q9Y3M8 1113 aa21.01■□□□□ 0.95
SOX2-201ENST00000325404 CFHP08603 1231 aa21■□□□□ 0.95
SOX2-201ENST00000325404 CCNB1P14635 433 aa21■□□□□ 0.95
SOX2-201ENST00000325404 NF2P35240 595 aa21■□□□□ 0.95
SOX2-201ENST00000325404 POLGP54098 1239 aaPredicted RBP21■□□□□ 0.95
SOX2-201ENST00000325404 NOP14P78316 857 aaKnown RBP21■□□□□ 0.95
SOX2-201ENST00000325404 USP50Q70EL3 339 aaPredicted RBP21■□□□□ 0.95
SOX2-201ENST00000325404 DENND1AQ8TEH3 1009 aa21■□□□□ 0.95
SOX2-201ENST00000325404 ACAD9Q9H845 621 aa21■□□□□ 0.95
SOX2-201ENST00000325404 DDX56Q9NY93 547 aaKnown RBP21■□□□□ 0.95
SOX2-201ENST00000325404 BAIAP2L1Q9UHR4 511 aa21■□□□□ 0.95
SOX2-201ENST00000325404 ADGRA2Q96PE1 1338 aa21■□□□□ 0.95
SOX2-201ENST00000325404 CNTNAP2Q9UHC6 1331 aa21■□□□□ 0.95
SOX2-201ENST00000325404 COL11A1P12107 1806 aaPredicted RBP21■□□□□ 0.95
SOX2-201ENST00000325404 TCRBV5S1A1TA0A578 114 aa21■□□□□ 0.95
SOX2-201ENST00000325404 ATG7O95352 703 aa21■□□□□ 0.95
SOX2-201ENST00000325404 CD58P19256 250 aa21■□□□□ 0.95
SOX2-201ENST00000325404 ACOT2P49753 483 aa21■□□□□ 0.95
SOX2-201ENST00000325404 C2CD6Q53TS8 623 aa21■□□□□ 0.95
SOX2-201ENST00000325404 GDAP1Q8TB36 358 aa21■□□□□ 0.95
SOX2-201ENST00000325404 NKD2Q969F2 451 aaPredicted RBP21■□□□□ 0.95
SOX2-201ENST00000325404 HAPLN2Q9GZV7 340 aa21■□□□□ 0.95
SOX2-201ENST00000325404 EBF2Q9HAK2 575 aa21■□□□□ 0.95
SOX2-201ENST00000325404 MAFBQ9Y5Q3 323 aaPredicted RBP21■□□□□ 0.95
SOX2-201ENST00000325404 K7ERI5 159 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 ALOX15BO15296 676 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 ASMTLO95671 621 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 CGB2Q6NT52 195 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 FITM2Q8N6M3 262 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 ZNF606Q8WXB4 792 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 CXorf56Q9H5V9 222 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 FETUBQ9UGM5 382 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 SHOC2Q9UQ13 582 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 NUB1Q9Y5A7 615 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 EXOC1LA0A1B0GW35 172 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 ATP5HO75947 161 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 ITGAVP06756 1048 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 MTERF2Q49AM1 385 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 DAB2IPQ5VWQ8 1189 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 PNMA8AQ86V59 439 aaPredicted RBP20.99■□□□□ 0.95
SOX2-201ENST00000325404 PASD1Q8IV76 773 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 NIPA2Q8N8Q9 360 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 DEPTORQ8TB45 409 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
SOX2-201ENST00000325404 CNKSR2Q8WXI2 1034 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 KLHL29Q96CT2 875 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 MSTO1Q9BUK6 570 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 FRMD8P1Q9BZ68 369 aaPredicted RBP20.99■□□□□ 0.95
SOX2-201ENST00000325404 TBK1Q9UHD2 729 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 SLC24A2Q9UI40 661 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 USTQ9Y2C2 406 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 EFR3BQ9Y2G0 817 aa20.99■□□□□ 0.95
SOX2-201ENST00000325404 GLRA2P23416 452 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 GCAP28676 217 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 EPHX2P34913 555 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 FAM84AQ96KN4 292 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 NIFKQ9BYG3 293 aaKnown RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 PITPNM3Q9BZ71 974 aa20.98■□□□□ 0.95
SOX2-201ENST00000325404 SSU72Q9NP77 194 aaKnown RBP20.98■□□□□ 0.95
SOX2-201ENST00000325404 SAYSD1Q9NPB0 183 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms