RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 MASP1P48740 699 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 NDUFV1P49821 464 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 TLE1Q04724 770 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 FHL1Q13642 323 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SLC18B1Q6NT16 456 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SLC2A7Q6PXP3 512 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 CRELD2Q6UXH1 353 aaPredicted RBP4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SLC30A10Q6XR72 485 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 MIGA2Q7L4E1 593 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 DENND1AQ8TEH3 1009 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 RGMAQ96B86 450 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SMOQ99835 787 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 WACQ9BTA9 647 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 AMBRA1Q9C0C7 1298 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SLKQ9H2G2 1235 aaPredicted RBP4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SMOC2Q9H3U7 446 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 MRPS18AQ9NVS2 196 aaKnown RBP4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 SH3BP4Q9P0V3 963 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 TBC1D30Q9Y2I9 924 aa4.15□□□□□ -1.75
CBX3P1-201ENST00000325243 POLRMTO00411 1230 aaKnown RBP4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 PPP6CO00743 305 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 CCT4P50991 539 aaKnown RBP4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 TBCCQ15814 346 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 GPR162Q16538 588 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 AWAT2Q6E213 333 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 DMRTA2Q96SC8 542 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 OSBPL9Q96SU4 736 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 ACTRT3Q9BYD9 372 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 ETAA1Q9NY74 926 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 SPATA31A3Q5VYP0 1347 aa4.14□□□□□ -1.75
CBX3P1-201ENST00000325243 TRIM75PA6NK02 468 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 PPEF2O14830 753 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 TRIAP1O43715 76 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 SGTAO43765 313 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 VIL1P09327 827 aaKnown RBP4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 IL10RAQ13651 578 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 BMPR2Q13873 1038 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 C3orf36Q3SXR2 165 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 CT47A1Q5JQC4 288 aaPredicted RBP4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 PLAC9Q5JTB6 97 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 PRAMEF17Q5VTA0 474 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 CEP85Q6P2H3 762 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 ZNF551Q7Z340 670 aaPredicted RBP4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 KRT26Q7Z3Y9 468 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 SPATS2Q86XZ4 545 aaKnown RBP4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 WDR66Q8TBY9 1149 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 SSH1Q8WYL5 1049 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 HDAC10Q969S8 669 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 SPRTNQ9H040 489 aaPredicted RBP4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 ARHGEF3Q9NR81 526 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 SAP30BPQ9UHR5 308 aaKnown RBP4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 LIMCH1Q9UPQ0 1083 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 IPPQ9Y573 584 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 WASHC2AQ641Q2 1341 aa4.13□□□□□ -1.75
CBX3P1-201ENST00000325243 SMIM22K7EJ46 135 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 NDUFS2O75306 463 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 JTBO76095 146 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 ANXA1P04083 346 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 PDHA1P08559 390 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 EDNRBP24530 442 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 FOXG1P55316 489 aaPredicted RBP4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 KLF1Q13351 362 aaPredicted RBP4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 RAB39AQ14964 217 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 CLUL1Q15846 466 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 KLHL22Q53GT1 634 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 RBM20Q5T481 1227 aaKnown RBP4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 RNF219Q5W0B1 726 aaPredicted RBP4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 TAF2Q6P1X5 1199 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 ZNF517Q6ZMY9 492 aaPredicted RBP4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 GADL1Q6ZQY3 521 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 AMOTL1Q8IY63 956 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 AOPEPQ8N6M6 819 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 PSD4Q8NDX1 1056 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 KLHDC4Q8TBB5 520 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 SCAMP4Q969E2 229 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 CLPTM1LQ96KA5 538 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 CAMKK2Q96RR4 588 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 SERHLQ9NQF3 203 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 ANLNQ9NQW6 1124 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 ELOVL5Q9NYP7 299 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 PCDHB1Q9Y5F3 818 aa4.12□□□□□ -1.75
CBX3P1-201ENST00000325243 PRRT4C9JH25 899 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 F2RL2O00254 374 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 HTRA2O43464 458 aaPredicted RBP4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 TUBB4AP04350 444 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 NDUFB7P17568 137 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 CHRM3P20309 590 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 C5AR1P21730 350 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 PSMC1P62191 440 aaKnown RBP4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 CCDC93Q567U6 631 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 VPS53Q5VIR6 699 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 SLC29A4Q7RTT9 530 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 PDSS2Q86YH6 399 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 FAM109AQ8N4B1 249 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 JADE3Q92613 823 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 KAT5Q92993 513 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 CALCOCO1Q9P1Z2 691 aa4.11□□□□□ -1.75
CBX3P1-201ENST00000325243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms