RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 COL25A1Q9BXS0 654 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-201ENST00000324444 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.26■□□□□ 0.672e-7■■■■■ 181.9
SYNE4-201ENST00000324444 SPTLC3Q9NUV7 552 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 LRFN2Q9ULH4 789 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 PRRC2BQ5JSZ5 2229 aaKnown RBP19.26■□□□□ 0.67
SYNE4-201ENST00000324444 PTGESO14684 152 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 MTF1Q14872 753 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 TOGARAM2Q6ZUX3 1019 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 ABI1Q8IZP0 508 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 KAT5Q92993 513 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 CXCL16Q9H2A7 254 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 CISHQ9NSE2 258 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 GDAP2Q9NXN4 497 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 TUBGCP4Q9UGJ1 667 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 KIAA1257Q9ULG3 409 aa19.25■□□□□ 0.67
SYNE4-201ENST00000324444 TDRD15B5MCY1 1934 aaKnown RBP19.24■□□□□ 0.67
SYNE4-201ENST00000324444 CYP26A1O43174 497 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 KRT86O43790 486 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 PAEPP09466 180 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 CYP11B1P15538 503 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 ACO1P21399 889 aaKnown RBP19.24■□□□□ 0.67
SYNE4-201ENST00000324444 MAGEA1P43355 309 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 ASPAP45381 313 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 CDR2Q01850 454 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 KIF5AQ12840 1032 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 TMEM270Q6UE05 265 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 TRIM72Q6ZMU5 477 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 ZNF571Q7Z3V5 609 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-201ENST00000324444 RBBP8NLQ8NC74 664 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-201ENST00000324444 LPPQ93052 612 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 C18orf25Q96B23 403 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-201ENST00000324444 FAM84AQ96KN4 292 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 ZFP42Q96MM3 310 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 ADAMTS1Q9UHI8 967 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 MTUS1Q9ULD2 1270 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 INTUQ9ULD6 942 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 INSL6Q9Y581 213 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 REV3LO60673 3130 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 TTC28Q96AY4 2481 aa19.24■□□□□ 0.67
SYNE4-201ENST00000324444 LINC01553A4QN01 128 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 KPNA7A9QM74 516 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 MED7O43513 233 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 PLEKP08567 350 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-201ENST00000324444 CLCN1P35523 988 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 VAV2P52735 878 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 TUSC3Q13454 348 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 NAB2Q15742 525 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 NPAS4Q8IUM7 802 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 UBR7Q8N806 425 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 GSTCDQ8NEC7 633 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 EPS8L1Q8TE68 723 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 PPP1R13BQ96KQ4 1090 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 MMS19Q96T76 1030 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 RNF19AQ9NV58 838 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 PCDHA13Q9Y5I0 950 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 MTCH2Q9Y6C9 303 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 COL4A6Q14031 1691 aa19.23■□□□□ 0.67
SYNE4-201ENST00000324444 FNDC1Q4ZHG4 1894 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-201ENST00000324444 HUS1O60921 280 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 UPP2O95045 317 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 GZMAP12544 262 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 SCNN1GP51170 649 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 GUCY2FP51841 1108 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 PTPN14Q15678 1187 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 NOMO2Q5JPE7 1267 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 ALKBH5Q6P6C2 394 aaKnown RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 UNC93AQ86WB7 457 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 SPATA18Q8TC71 538 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 TOP1MTQ969P6 601 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 CALR3Q96L12 384 aaKnown RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 FAM193BQ96PV7 902 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 TGS1Q96RS0 853 aaKnown RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 DESI2Q9BSY9 194 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 MRPL9Q9BYD2 267 aaKnown RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 PDCL3Q9H2J4 239 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 TRMT1Q9NXH9 659 aaKnown RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 NAGPAQ9UK23 515 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 BARX2Q9UMQ3 279 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-201ENST00000324444 SNX9Q9Y5X1 595 aa19.22■□□□□ 0.67
SYNE4-201ENST00000324444 CARNS1A5YM72 827 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 TACC1O75410 805 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 PNMA6AP0CW24 399 aaPredicted RBP19.21■□□□□ 0.67
SYNE4-201ENST00000324444 POU3F3P20264 500 aaPredicted RBP19.21■□□□□ 0.67
SYNE4-201ENST00000324444 GNA15P30679 374 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 ZNF132P52740 706 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 HTRA4P83105 476 aaPredicted RBP19.21■□□□□ 0.67
SYNE4-201ENST00000324444 GFPT1Q06210 699 aaPredicted RBP19.21■□□□□ 0.67
SYNE4-201ENST00000324444 INCA1Q0VD86 236 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 STILQ15468 1287 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 CCDC122Q5T0U0 273 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 SLC30A5Q8TAD4 765 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 YME1L1Q96TA2 773 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 ARID3AQ99856 593 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 SYT11Q9BT88 431 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 THEGQ9P2T0 379 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 MYO1AQ9UBC5 1043 aa19.21■□□□□ 0.67
SYNE4-201ENST00000324444 NOCTQ9UK39 431 aaKnown RBP19.21■□□□□ 0.67
SYNE4-201ENST00000324444 CEP83Q9Y592 693 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms