RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 CYP4F11Q9HBI6 524 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 CASS4Q9NQ75 786 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 CHST12Q9NRB3 414 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PAK5Q9P286 719 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 DBR1Q9UK59 544 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 WEE2P0C1S8 567 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PRR29P0C7W0 189 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 GHRP10912 638 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 SHMT1P34896 483 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 HADHAP40939 763 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PPARDQ03181 441 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 SF3A3Q12874 501 aaKnown RBP eCLIP9.39□□□□□ -0.91
CD28-201ENST00000324106 MAP2K5Q13163 448 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PDAP1Q13442 181 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 PTGISQ16647 500 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 MUM1Q2TAK8 710 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 CCDC144BQ3MJ40 725 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PABPC1LQ4VXU2 614 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 RETSATQ6NUM9 610 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 RRM2BQ7LG56 351 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 GBP7Q8N8V2 638 aaPredicted RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 MIPOL1Q8TD10 442 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 TMC2Q8TDI7 906 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 WDR18Q9BV38 432 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 SENP6Q9GZR1 1112 aaPredicted RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 WDCPQ9H6R7 721 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 AGPAT3Q9NRZ7 376 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 A0A087WZ62 844 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 KCNN4O15554 427 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PRPF4O43172 522 aaKnown RBP eCLIP9.39□□□□□ -0.91
CD28-201ENST00000324106 TLR2O60603 784 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 PYGBP11216 843 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 FASTKD1Q53R41 847 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 AARS2Q5JTZ9 985 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 GLRA4Q5JXX5 417 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 FBXO47Q5MNV8 452 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 OVOS1Q6IE37 1185 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 CCDC149Q6ZUS6 474 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 DSG4Q86SJ6 1040 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 LINC00523Q86TU6 105 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 RASSF3Q86WH2 238 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 ARHGEF26Q96DR7 871 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 XPO6Q96QU8 1125 aaKnown RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
CD28-201ENST00000324106 ZNF518BQ9C0D4 1074 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 L3MBTL1Q9Y468 752 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 UMODL1Q5DID0 1318 aa9.39□□□□□ -0.91
CD28-201ENST00000324106 RASA4BC9J798 803 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PIK3R2O00459 728 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 SLC9A3R1O14745 358 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 RASA4O43374 803 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 VTNP04004 478 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 SETSIPP0DME0 302 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PPM1AP35813 382 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 NPTX2P47972 431 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PTK6Q13882 451 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 HIF1AQ16665 826 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ZC2HC1CQ53FD0 456 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 GPATCH11Q8N954 259 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 CSGALNACT1Q8TDX6 532 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 TTC17Q96AE7 1141 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PPCSQ9HAB8 311 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 EML4Q9HC35 981 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 AGO4Q9HCK5 861 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 TXLNGQ9NUQ3 528 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 KLHL11Q9NVR0 708 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PSD3Q9NYI0 1048 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PKD2L2Q9NZM6 624 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 CAND2O75155 1236 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 SPAG6O75602 509 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 STMN1P16949 149 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 HMOX2P30519 316 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 STK4Q13043 487 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PDIA2Q13087 525 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 CUL2Q13617 745 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 CAPRIN1Q14444 709 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 PGM5Q15124 567 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 KCTD16Q68DU8 428 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 APOBEC3HQ6NTF7 200 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 CCDC137Q6PK04 289 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 NECAB2Q7Z6G3 386 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 NCLNQ969V3 563 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 CYTH2Q99418 400 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 TLR8Q9NR97 1041 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 CRLS1Q9UJA2 301 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PARNO95453 639 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 ARP10275 920 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 KCNA2P16389 499 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 DPYDQ12882 1025 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ZNF284Q2VY69 593 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 TIGD7Q6NT04 549 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PDCD7Q8N8D1 485 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms