RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 E9PLN8 166 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 PYCARD-AS1I3L0S3 204 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 TRIM38O00635 465 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 FFAR2O15552 330 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 TEX33O43247 280 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 TLR5O60602 858 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 PLA2G6O60733 806 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 PRSS23O95084 383 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 CSTBP04080 98 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 NPEPPSP55786 919 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 MESP2Q0VG99 397 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 MRPL49Q13405 166 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 BIRC3Q13489 604 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 RIN1Q13671 783 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 BLMHQ13867 455 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 PDCD2Q16342 344 aaPredicted RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 FAM26FQ5R3K3 315 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 UTP14CQ5TAP6 766 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ATG14Q6ZNE5 492 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF354CQ86Y25 554 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 KBTBD2Q8IY47 623 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 GPR135Q8IZ08 494 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 DNAJC5GQ8N7S2 189 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 IPO4Q8TEX9 1081 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 VKORC1Q9BQB6 163 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 LSM14BQ9BX40 385 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 STK33Q9BYT3 514 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 EPC1Q9H2F5 836 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 GSTO2Q9H4Y5 243 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 OBP2BQ9NPH6 170 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 ITGB1BP2Q9UKP3 347 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 SLC39A10Q9ULF5 831 aa4.79□□□□□ -1.64
SMCO3-201ENST00000316048 CNOT6Q9ULM6 557 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 SPAG9O60271 1321 aaKnown RBP4.79□□□□□ -1.64
SMCO3-201ENST00000316048 RTEL1-TNFRSF6BF6WH68 1400 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 LGALS16A8MUM7 142 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 M0QYG6 137 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 M0R3H8 397 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 SLC26A4O43511 780 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 B4GALT4O60513 344 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 RARBP10826 455 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 GLDCP23378 1020 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 CARSP49589 748 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 IRAK1P51617 712 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 PTTG1IPP53801 180 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 DDX10Q13206 875 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 PFKFB4Q16877 469 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 LIN54Q6MZP7 749 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 CACNA2D3Q8IZS8 1091 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 TP53I13Q8NBR0 393 aaPredicted RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 RAPGEF4Q8WZA2 1011 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 MUL1Q969V5 352 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 ZC3H10Q96K80 434 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 TINAGL1Q9GZM7 467 aaPredicted RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 UBA5Q9GZZ9 404 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 CHST8Q9H2A9 424 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 AGO4Q9HCK5 861 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 CASS4Q9NQ75 786 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 C9orf78Q9NZ63 289 aaPredicted RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 JKAMPQ9P055 326 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 LZTS1Q9Y250 596 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 B4GALT3O60512 393 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 HAUS5O94927 633 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 AGFG2O95081 481 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 KIF20AO95235 890 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 GRPP07492 148 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 MTHFD1P11586 935 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 MYL4P12829 197 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 POU5F1BQ06416 359 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 NFYCQ13952 458 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 HABP2Q14520 560 aaPredicted RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 PGBD2Q6P3X8 592 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 ZDHHC24Q6UX98 284 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 NBPF11Q86T75 865 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 AFAP1Q8N556 730 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 SPATA5Q8NB90 893 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 RABGGTAQ92696 567 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 DACT3Q96B18 629 aaPredicted RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 TBC1D20Q96BZ9 403 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 TMEM176AQ96HP8 235 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 KLHL32Q96NJ5 620 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 HEPHQ9BQS7 1158 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 SORBS1Q9BX66 1292 aaKnown RBP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF518BQ9C0D4 1074 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 MAGEH1Q9H213 219 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 JADE2Q9NQC1 790 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 LRFN1Q9P244 771 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMCO3-201ENST00000316048 KDM5DQ9BY66 1539 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 DUOX2Q9NRD8 1548 aa4.78□□□□□ -1.64
SMCO3-201ENST00000316048 FANCAO15360 1455 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ARHGEF12Q9NZN5 1544 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 A0A087WWL8 130 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 A0A1W2PRX2 142 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ACKR2O00590 384 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 PODXLO00592 558 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 NPC1O15118 1278 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 TNFRSF6BO95407 300 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 AGR2O95994 175 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms