RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 C10orf76Q5T2E6 689 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 TWF2Q6IBS0 349 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 C8orf74Q6P047 294 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 C1orf54Q8WWF1 131 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 NFKBIZQ9BYH8 718 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 XPNPEP3Q9NQH7 507 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 MIOSQ9NXC5 875 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 SAE1Q9UBE0 346 aaPredicted RBP7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 R3HDM2Q9Y2K5 976 aaKnown RBP7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 CDY2AQ9Y6F7 541 aa7.45□□□□□ -1.22
LYSMD3-201ENST00000315948 MCF2P10911 925 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 KRT10P13645 584 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PAFAH1B1P43034 410 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PSMC1P62191 440 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CENPCQ03188 943 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SREBF2Q12772 1141 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TRIP13Q15645 432 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 FAM187BQ17R55 369 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ZNF667Q5HYK9 610 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CLEC4CQ8WTT0 213 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CD101Q93033 1021 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CCDC102AQ96A19 550 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 GCOM2Q9BZD3 368 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TRPV6Q9H1D0 765 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 L1RE1Q9UN81 338 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 IPPQ9Y573 584 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 VCANP13611 3396 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 A0A0A6YYK5 440 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ADAMTS4O75173 837 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 GZMAP12544 262 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 THPOP40225 353 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 MLH1P40692 756 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 FCGRTP55899 365 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SH3TC2Q8TF17 1288 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 HAUS1Q96CS2 278 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 MRPL42Q9Y6G3 142 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CHD9Q3L8U1 2897 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 LOC102724159A0A0B4J2E5 919 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SMIM28A0A1B0GU29 152 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ZC3H11AO75152 810 aaKnown RBP eCLIP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 GABBR2O75899 941 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ERBB2P04626 1255 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PRLRP16471 622 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TFE3P19532 575 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CD52P31358 61 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 NRLP54845 237 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 MTM1Q13496 603 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PWP2Q15269 919 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 DEFB115Q30KQ5 88 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TRNP1Q6NT89 227 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SLC27A1Q6PCB7 646 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SMC1BQ8NDV3 1235 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 C3orf58Q8NDZ4 430 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 KCNN1Q92952 543 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 RNF25Q96BH1 459 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TMEM59LQ9UK28 342 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ST3GAL5Q9UNP4 418 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PDE4DIPQ5VU43 2346 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SMIM35A0A1B0GVV1 85 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PTGESO14684 152 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TLR3O15455 904 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 DUSP11O75319 330 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CCDC130P13994 396 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 RFC1P35251 1148 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SP3Q02447 781 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CKAP4Q07065 602 aaKnown RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CASP8Q14790 479 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CCNI2Q6ZMN8 369 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 IFNLR1Q8IU57 520 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 TAB3Q8N5C8 712 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CCDC33Q8N5R6 958 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ARFGAP1Q8N6T3 406 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 NETO2Q8NC67 525 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 GSTCDQ8NEC7 633 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SOCS4Q8WXH5 440 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SNX27Q96L92 541 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 PWWP2AQ96N64 755 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 GAD1Q99259 594 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 ADPGKQ9BRR6 497 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 SELENOOQ9BVL4 669 aa7.44□□□□□ -1.22
LYSMD3-201ENST00000315948 CITO14578 2027 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CCDC151A5D8V7 595 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 M0QYV0 167 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 PGRMC1O00264 195 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 DAPK3O43293 454 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 RRP9O43818 475 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 VEGFBP49765 207 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 SOWAHAQ2M3V2 549 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 PPP1R26Q5T8A7 1209 aaPredicted RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 KAZNQ674X7 775 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 MMGT1Q8N4V1 131 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 PRELID2Q8N945 189 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 RHOBTB2Q9BYZ6 727 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 ADAM33Q9BZ11 813 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CHST7Q9NS84 486 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 STIM2Q9P246 746 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms