RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 EHBP1Q8NDI1 1231 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 HDAC7Q8WUI4 952 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 JAKMIP2Q96AA8 810 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 NT5C1BQ96P26 610 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 ACBD6Q9BR61 282 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 BCO2Q9BYV7 579 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 GCNT4Q9P109 453 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 DAAM1Q9Y4D1 1078 aa19.17■□□□□ 0.66
SSSCA1-201ENST00000309328 GABRDO14764 452 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 TEX28O15482 410 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 RFX1P22670 979 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 KLRC2P26717 231 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 GCNT1Q02742 428 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 RAB33AQ14088 237 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 MAPRE1Q15691 268 aaKnown RBP19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 MIIPQ5JXC2 388 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 PRSS55Q6UWB4 352 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 UNC93AQ86WB7 457 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 DCP1BQ8IZD4 617 aaKnown RBP19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 TMEM130Q8N3G9 435 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 C2orf15Q8WU43 125 aaKnown RBP19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 B3GALT6Q96L58 329 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 KLHL5Q96PQ7 755 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 HSD3B7Q9H2F3 369 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 SNX25Q9H3E2 840 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 FBXL5Q9UKA1 691 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 STXBP5LQ9Y2K9 1186 aa19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 COL4A4P53420 1690 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-201ENST00000309328 LGALS16A8MUM7 142 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 GLUD1P00367 558 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 COPB1P53618 953 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 TCEAL5Q5H9L2 206 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 LUZP1Q86V48 1076 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 EFHBQ8N7U6 833 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 AUTS2Q8WXX7 1259 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 CASP10Q92851 521 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 SEMA4DQ92854 862 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 TNIP3Q96KP6 325 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 PLEKHA4Q9H4M7 779 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 DDX43Q9NXZ2 648 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 TAB2Q9NYJ8 693 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 HSFX1Q9UBD0 423 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 TIMM13Q9Y5L4 95 aaPredicted RBP19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 CDY1Q9Y6F8 540 aa19.15■□□□□ 0.66
SSSCA1-201ENST00000309328 CLASP2O75122 1294 aaKnown RBP19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 TPM3P06753 285 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 GNL1P36915 607 aaPredicted RBP19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 ASPAP45381 313 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 NRIP1P48552 1158 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 INCA1Q0VD86 236 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 NFE2Q16621 373 aaPredicted RBP19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 TMEM184AQ6ZMB5 413 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 ZNF461Q8TAF7 563 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 LMO3Q8TAP4 145 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 CLSTN3Q9BQT9 956 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 PI4K2AQ9BTU6 479 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 INTS2Q9H0H0 1204 aaKnown RBP19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 APOBEC3GQ9HC16 384 aaKnown RBP19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 DZANK1Q9NVP4 752 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 CDH9Q9ULB4 789 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 BARX2Q9UMQ3 279 aaPredicted RBP19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 PLXNA4Q9HCM2 1894 aa19.14■□□□□ 0.65
SSSCA1-201ENST00000309328 CSPG5O95196 566 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 CPB1P15086 417 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 OR1D2P34982 312 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 CLCN4P51793 760 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 GPR17Q13304 367 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 CUL2Q13617 745 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 COL19A1Q14993 1142 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 TRIM65Q6PJ69 517 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 OR6B3Q8NGW1 331 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 KBTBD7Q8WVZ9 684 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 VPS16Q9H269 839 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 APEX2Q9UBZ4 518 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 AFF4Q9UHB7 1163 aaKnown RBP19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 MYO9BQ13459 2157 aa19.13■□□□□ 0.65
SSSCA1-201ENST00000309328 SCN1AP35498 2009 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 SERPINC1P01008 464 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 HOXB8P17481 243 aaPredicted RBP19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 HYAL1Q12794 435 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 UVSSAQ2YD98 709 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 SCARA3Q6AZY7 606 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 SPOPLQ6IQ16 392 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 CCDC149Q6ZUS6 474 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 ADGRD2Q7Z7M1 963 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 PABPC5Q96DU9 382 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 ZCWPW1Q9H0M4 648 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 SMYD3Q9H7B4 428 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 POLIQ9UNA4 740 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 PCDHGC5Q9Y5F6 944 aa19.12■□□□□ 0.65
SSSCA1-201ENST00000309328 A8MXQ7 604 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ABLIM3O94929 683 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ATP1A3P13637 1013 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ATF2P15336 505 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 PON1P27169 355 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ELF1P32519 619 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 MFAP3P55082 362 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ROR1Q01973 937 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 UBXN1Q04323 297 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 INTS6LQ5JSJ4 861 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms