RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 TRAPPC3O43617 180 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 PDHA1P08559 390 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 VEGFAP15692 232 aaPredicted RBP10.38□□□□□ -0.75
TMOD3-201ENST00000308580 RAD23BP54727 409 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 ANGPTL8Q6UXH0 198 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 NCLNQ969V3 563 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 CYFIP2Q96F07 1278 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.38□□□□□ -0.75
TMOD3-201ENST00000308580 GARTP22102 1010 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 TAS2R42Q7RTR8 314 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 PABPC3Q9H361 631 aaKnown RBP10.38□□□□□ -0.75
TMOD3-201ENST00000308580 GZMAP12544 262 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 ALDH18A1P54886 795 aaKnown RBP10.38□□□□□ -0.75
TMOD3-201ENST00000308580 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 SLC7A14Q8TBB6 771 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 PABPC5Q96DU9 382 aaKnown RBP10.38□□□□□ -0.75
TMOD3-201ENST00000308580 ASIC4Q96FT7 647 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 EGFL8Q99944 293 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 LBHD1Q9BQE6 289 aaPredicted RBP10.38□□□□□ -0.75
TMOD3-201ENST00000308580 F8W8V4 182 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 NAMPTP43490 491 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 KCNK18Q7Z418 384 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 SLC26A7Q8TE54 656 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 ERP27Q96DN0 273 aa10.38□□□□□ -0.75
TMOD3-201ENST00000308580 GNL1P36915 607 aaPredicted RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 STX3Q13277 289 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 FBXW10Q5XX13 1052 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ST13P4Q8IZP2 240 aaPredicted RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ARHGEF28Q8N1W1 1705 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 MGEA5O60502 916 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 HMBSP08397 361 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ITGA4P13612 1032 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 CUL3Q13618 768 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 PTGISQ16647 500 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 MDH1BQ5I0G3 518 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 KCNT1Q5JUK3 1230 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 RABGAP1LQ5R372 815 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 PCNX4Q63HM2 1172 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 FBXO25Q8TCJ0 367 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 PPP1R36Q96LQ0 422 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 KATNAL1Q9BW62 490 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 MAP3K20Q9NYL2 800 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 MAP3K6O95382 1288 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 PGM1P36871 562 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 BOLA3Q53S33 107 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 FAXCQ5TGI0 409 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 APOBEC3HQ6NTF7 200 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 RANBP17Q9H2T7 1088 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 SPATS2LQ9NUQ6 558 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 NDE1Q9NXR1 346 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 PSD3Q9NYI0 1048 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 HOXD10P28358 340 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 EFTUD2Q15029 972 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 DGKDQ16760 1214 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ZFPM1Q8IX07 1006 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 GANCQ8TET4 914 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 TRPV6Q9H1D0 765 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 OLA1Q9NTK5 396 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 KLK14Q9P0G3 267 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 GAS2O43903 313 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ENO1P06733 434 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ACADSBP45954 432 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 GRIK5Q16478 980 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ACCSLQ4AC99 568 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ATPAF2Q8N5M1 289 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
TMOD3-201ENST00000308580 PXMP2Q9NR77 195 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 E2F8A0AVK6 867 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 ZBBXA8MT70 800 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 FAM107AO95990 144 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 AMHR2Q16671 573 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 NOTUMQ6P988 496 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 LRRN4CLQ8ND94 238 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 TRIM15Q9C019 465 aa10.37□□□□□ -0.75
TMOD3-201ENST00000308580 SLITRK3O94933 977 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 SNRPAP09012 282 aaKnown RBP10.36□□□□□ -0.75
TMOD3-201ENST00000308580 RARRES1P49788 294 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 ZNF157P51786 506 aaPredicted RBP10.36□□□□□ -0.75
TMOD3-201ENST00000308580 TBX2Q13207 712 aaPredicted RBP10.36□□□□□ -0.75
TMOD3-201ENST00000308580 PDK1Q15118 436 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 SV2CQ496J9 727 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 SLC47A2Q86VL8 602 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 DDIASQ8IXT1 998 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 PPIL6Q8IXY8 311 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 ASAP3Q8TDY4 903 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 TRAF3IP3Q9Y228 551 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 PCSK1P29120 753 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 HADHAP40939 763 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 USP10Q14694 798 aaKnown RBP10.36□□□□□ -0.75
TMOD3-201ENST00000308580 PPCSQ9HAB8 311 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 KCNQ5Q9NR82 932 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 NEMP1O14524 444 aa10.36□□□□□ -0.75
TMOD3-201ENST00000308580 TFRCP02786 760 aaKnown RBP10.36□□□□□ -0.75
TMOD3-201ENST00000308580 CETPP11597 493 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms