RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PTPREP23469 700 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 KRR1Q13601 381 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 TSGA10IPQ3SY00 556 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 HABP4Q5JVS0 413 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 TRMT10CQ7L0Y3 403 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 ING2Q9H160 280 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 TRPV6Q9H1D0 765 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 STX18Q9P2W9 335 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 GGPS1O95749 300 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 RAB15P59190 212 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 SGO2Q562F6 1265 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 MMTAG2Q9BU76 263 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 MSTO1Q9BUK6 570 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 RPF1Q9H9Y2 349 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 PCDHA10Q9Y5I2 948 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 POTECB2RU33 542 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 RASA4BC9J798 803 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 PFDN6O15212 129 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 RASA4O43374 803 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 FGFR2P21802 821 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 RPL5P46777 297 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 MYL7Q01449 175 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 UBE2OQ9C0C9 1292 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 EBF2Q9HAK2 575 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 FAM153AQ9UHL3 310 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 IPPQ9Y573 584 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 MROH1Q8NDA8 1641 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 GRID2IPA4D2P6 1211 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 VCPP55072 806 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 OASLQ15646 514 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 RBM44Q6ZP01 1051 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 TOR1AIP2Q8NFQ8 470 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 CITED4Q96RK1 184 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 CENPOQ9BU64 300 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 MRPL39Q9NYK5 338 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 PCDHB4Q9Y5E5 795 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 GUCY1A2P33402 732 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 USP11P51784 963 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 EXOSC10Q01780 885 aaKnown RBP15.99■□□□□ 0.15
LEMD3-201ENST00000308330 KCNA1Q09470 495 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 DCLK2Q8N568 766 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 NAT14Q8WUY8 206 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 COQ6Q9Y2Z9 468 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 DISP2A7MBM2 1401 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 NEURL4Q96JN8 1562 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 HTR3EA5X5Y0 456 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 GOLGA8MH3BSY2 632 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 CLDN3O15551 220 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 LAMC2Q13753 1193 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 SMU1Q2TAY7 513 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 CNPY1Q3B7I2 92 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 ZNF212Q9UDV6 495 aa15.99■□□□□ 0.15
LEMD3-201ENST00000308330 TMEM191CA6NGB0 347 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 RGL2O15211 777 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 CFLARO15519 480 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 SNX2O60749 519 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 PRKACAP17612 351 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 HSPA13P48723 471 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 SNX32Q86XE0 403 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 RHPN2Q8IUC4 686 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 GRK7Q8WTQ7 553 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 NUDT12Q9BQG2 462 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 THTPAQ9BU02 230 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 PRDM5Q9NQX1 630 aaPredicted RBP15.98■□□□□ 0.15
LEMD3-201ENST00000308330 SYNJ2BP-COX16A0A087WUM0 186 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 H0Y626 953 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 ATF2P15336 505 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 FAPQ12884 760 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 TRIM25Q14258 630 aaKnown RBP15.98■□□□□ 0.15
LEMD3-201ENST00000308330 ADSSL1Q8N142 457 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 TTC39CQ8N584 583 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 GLIS2Q9BZE0 524 aaPredicted RBP15.98■□□□□ 0.15
LEMD3-201ENST00000308330 COX16Q9P0S2 106 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 N6AMT1Q9Y5N5 214 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 ZNF233A6NK53 670 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 SLC25A27O95847 323 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 PHKA2P46019 1235 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 GTF2A2P52657 109 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 BPIFB4P59827 614 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 KYNUQ16719 465 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 ZNF658Q5TYW1 1059 aaPredicted RBP15.98■□□□□ 0.15
LEMD3-201ENST00000308330 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 TRPV5Q9NQA5 729 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 SLC9A2Q9UBY0 812 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 DENND3A2RUS2 1198 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 M0R3G1 203 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 STAT5BP51692 787 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 PSMC5P62195 406 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 CCDC14Q49A88 953 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 TC2NQ8N9U0 490 aa15.98■□□□□ 0.15
LEMD3-201ENST00000308330 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms