RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 GIT2Q14161 759 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 NME8Q8N427 588 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 FITM2Q8N6M3 262 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 UCMAQ8WVF2 138 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 CRYGNQ8WXF5 182 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 ACCSQ96QU6 501 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 DDX50Q9BQ39 737 aaKnown RBP11.52□□□□□ -0.57
LSM3-201ENST00000306024 MAF1Q9H063 256 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 MIS12Q9H081 205 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
LSM3-201ENST00000306024 ATXN10Q9UBB4 475 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 ZFP69BQ9UJL9 534 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 RPS6KL1Q9Y6S9 549 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 H0YCG3 227 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 UNC5CO95185 931 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 ETS2P15036 469 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 UBL4BQ8N7F7 174 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 ACTRT1Q8TDG2 376 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 OLFM3Q96PB7 478 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 R3HDMLQ9H3Y0 253 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 PCIF1Q9H4Z3 704 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 BCAS3Q9H6U6 928 aa11.52□□□□□ -0.57
LSM3-201ENST00000306024 SCN4AP35499 1836 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 H0YGN5 161 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 EDIL3O43854 480 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 ZNF189O75820 626 aaPredicted RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 TMCC1O94876 653 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 IMPDH2P12268 514 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 APLP1P51693 650 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 LRRC63Q05C16 580 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 CNGA2Q16280 664 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 USP37Q86T82 979 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 CCNJLQ8IV13 435 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 TTC8Q8TAM2 541 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 SCG3Q8WXD2 468 aaKnown RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 PSPC1Q8WXF1 523 aaKnown RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 ERAP1Q9NZ08 941 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 NFS1Q9Y697 457 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 K7ERI5 159 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 TUBP50607 506 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 HTRA3P83110 453 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 MCL1Q07820 350 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 TMED2Q15363 201 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 UGCGQ16739 394 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 HAUS6Q7Z4H7 955 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 ABRAQ8N0Z2 381 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 ZNF784Q8NCA9 323 aaPredicted RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 POMGNT1Q8WZA1 660 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 EDEM3Q9BZQ6 932 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 ARHGEF3Q9NR81 526 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 NFASCO94856 1347 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 DENND3A2RUS2 1198 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 MYBP10242 640 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 SLC12A3P55017 1021 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 EMC2Q15006 297 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 KNOP1Q1ED39 458 aaKnown RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 ZC2HC1CQ53FD0 456 aaPredicted RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 CELF3Q5SZQ8 465 aaKnown RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 EXOC8Q8IYI6 725 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 MAML3Q96JK9 1138 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 TTC1Q99614 292 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 UBE2OQ9C0C9 1292 aaKnown RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 ANKFY1Q9P2R3 1169 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 FAF1Q9UNN5 650 aaPredicted RBP11.51□□□□□ -0.57
LSM3-201ENST00000306024 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
LSM3-201ENST00000306024 SPOPO43791 374 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 CETN2P41208 172 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 FLT3LGP49771 235 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 HSDL1Q3SXM5 330 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 GNASQ5JWF2 1037 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 C10orf76Q5T2E6 689 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 JAMLQ86YT9 394 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 TLCD1Q96CP7 247 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 TMEM206Q9H813 350 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 PREBQ9HCU5 417 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 DCTN4Q9UJW0 460 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 ANGPTL2Q9UKU9 493 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 FAM187AA6NFU0 413 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 SOX10P56693 466 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 TFDP1Q14186 410 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 KPNB1Q14974 876 aaKnown RBP11.5□□□□□ -0.57
LSM3-201ENST00000306024 DGKDQ16760 1214 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 MIIPQ5JXC2 388 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 HYIQ5T013 277 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.5□□□□□ -0.57
LSM3-201ENST00000306024 ATXN2LQ8WWM7 1075 aaKnown RBP11.5□□□□□ -0.57
LSM3-201ENST00000306024 ZIC5Q96T25 663 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 NMRK1Q9NWW6 199 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
LSM3-201ENST00000306024 GNA14O95837 355 aa11.5□□□□□ -0.57
LSM3-201ENST00000306024 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms