RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TWF2Q6IBS0 349 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ANKS1AQ92625 1134 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ELMO2Q96JJ3 720 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 PRRG3Q9BZD7 231 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TJP2Q9UDY2 1190 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ASAP1Q9ULH1 1129 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 PRG3Q9Y2Y8 225 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 BAG6P46379 1132 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 FAM83EQ2M2I3 478 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TRIM63Q969Q1 353 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SH3GL1Q99961 368 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ILKAPQ9H0C8 392 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 B2RBV5 119 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TKFCQ3LXA3 575 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 NUP93Q8N1F7 819 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 DAGLBQ8NCG7 672 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TPCN2Q8NHX9 752 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 VPS50Q96JG6 964 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ACAD9Q9H845 621 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SLC38A7Q9NVC3 462 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ZMYND8Q9ULU4 1186 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 APBA3O96018 575 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ENO3P13929 434 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 CRKP46108 304 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 RBP5P82980 135 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SNRNP48Q6IEG0 339 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 C3orf62Q6ZUJ4 267 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ANKMY2Q8IV38 441 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 UBE2OQ9C0C9 1292 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TASP1Q9H6P5 420 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SFI1A8K8P3 1242 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SUPT3HB4E1H0 165 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L15C9J2P7 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L13C9JLJ4 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L11C9JVI0 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L18D6R9N7 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L22D6RA61 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L17D6RBQ6 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L19D6RCP7 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L20D6RJB6 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 COILP38432 576 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ST13P50502 369 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L24Q0WX57 530 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TRIP4Q15650 581 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP17L6PQ6QN14 398 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 CCDC24Q8N4L8 307 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 MASTLQ96GX5 879 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 GABBR1Q9UBS5 961 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 DYTNA2CJ06 578 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ANKRD65E5RJM6 399 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 CYP26A1O43174 497 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TRIM49P0CI25 452 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TRIM49CP0CI26 452 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 NME3Q13232 169 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 BTBD8Q5XKL5 378 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ZFP1Q6P2D0 407 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 FASTKD5Q7L8L6 764 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 APPL2Q8NEU8 664 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 C17orf75Q9HAS0 396 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 SARS2Q9NP81 518 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 FAM153AQ9UHL3 310 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 TAGLN3Q9UI15 199 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 THRAP10827 490 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 VCPP55072 806 aaKnown RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 FMR1Q06787 632 aaKnown RBP eCLIP7.97□□□□□ -1.131e-6■■□□□ 14.3
SF3B3-201ENST00000302516 WASHC2DQ5SRD0 308 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 CACHD1Q5VU97 1274 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ZSWIM1Q9BR11 485 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 BRD8Q9H0E9 1235 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-201ENST00000302516 NEURL4Q96JN8 1562 aa7.97□□□□□ -1.13
SF3B3-201ENST00000302516 HIST1H2AGP0C0S8 130 aaPredicted RBP7.96□□□□□ -1.13
SF3B3-201ENST00000302516 IMPDH2P12268 514 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 HIST1H2ADP20671 130 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 CASP1P29466 404 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 MTFR1Q15390 333 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 C11orf63Q6NUN7 778 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 HIST1H2AHQ96KK5 128 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 HIST1H2AJQ99878 128 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 H2AFJQ9BTM1 129 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 EVPLLA8MZ36 301 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 MYO1GB0I1T2 1018 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 TIMM44O43615 452 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 EXTL3O43909 919 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 ANXA11P50995 505 aaKnown RBP7.96□□□□□ -1.13
SF3B3-201ENST00000302516 SYTL3Q4VX76 610 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 FIGNQ5HY92 759 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 GSG1L2A8MUP6 293 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 GLRA3O75311 464 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 PDE5AO76074 875 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 DLGAP3O95886 979 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 KRT20P35900 424 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 CHI3L2Q15782 390 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 CCDC142Q17RM4 750 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 PKN3Q6P5Z2 889 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 LRRC8DQ7L1W4 858 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 RNF135Q8IUD6 432 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms