RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 GYPCP04921 128 aa12.9□□□□□ -0.34
ABCA3-201ENST00000301732 CCND1P24385 295 aa12.9□□□□□ -0.34
ABCA3-201ENST00000301732 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
ABCA3-201ENST00000301732 MPP4Q96JB8 637 aa12.9□□□□□ -0.34
ABCA3-201ENST00000301732 SEMA6AQ9H2E6 1030 aa12.9□□□□□ -0.34
ABCA3-201ENST00000301732 STAP1Q9ULZ2 295 aa12.9□□□□□ -0.34
ABCA3-201ENST00000301732 IQCMA0A1B0GVH7 501 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 PHKA2P46019 1235 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 LAMB3Q13751 1172 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 DHX34Q14147 1143 aaKnown RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 E2F7Q96AV8 911 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 CCDC134Q9H6E4 229 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 DCP1AQ9NPI6 582 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 NSMCE4AQ9NXX6 385 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 MLH3Q9UHC1 1453 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ARHGEF37A1IGU5 675 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 TRIM43BA6NCK2 446 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 TRIM49D1C9J1S8 452 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 UCHL3P15374 230 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 SIX5Q8N196 739 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 UBASH3BQ8TF42 649 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ZNF669Q96BR6 464 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ECSITQ9BQ95 431 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 CPSF4O95639 269 aaKnown RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 FAM86B2P0C5J1 330 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 NEDD8Q15843 81 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 PGK2P07205 417 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 LTKP29376 864 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 OTUD3Q5T2D3 398 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 THAP2Q9H0W7 228 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 MYMKA6NI61 221 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ZNF682O95780 498 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 GSNP06396 782 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ABCB1P08183 1280 aaPredicted RBP12.89□□□□□ -0.35
ABCA3-201ENST00000301732 GSTM1P09488 218 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ITGB6P18564 788 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 BMPR2Q13873 1038 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 LRRC8BQ6P9F7 803 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 ZFP42Q96MM3 310 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 TRIM54Q9BYV2 358 aa12.89□□□□□ -0.35
ABCA3-201ENST00000301732 F5H6K3 240 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 H3BQF6 201 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ATP9AO75110 1047 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 KLRC3Q07444 240 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 C16orf72Q14CZ0 275 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 DGKKQ5KSL6 1271 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 C11orf63Q6NUN7 778 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 C16orf89Q6UX73 402 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 EFCAB3Q8N7B9 438 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 EHD4Q9H223 541 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 GTF2H1P32780 548 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ARF5P84085 180 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 SURF1Q15526 300 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 AGGF1Q8N302 714 aaeCLIP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 C6orf62Q9GZU0 229 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 FAM153AQ9UHL3 310 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ATP10BO94823 1461 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 NR5A2O00482 541 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 SCTRP47872 440 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 SLC18A3Q16572 532 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ATPAF2Q8N5M1 289 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 MRPL4Q9BYD3 311 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 BARHL2Q9NY43 387 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 DDX56Q9NY93 547 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 RRN3P2A6NIE6 340 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 MAP3K10Q02779 954 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 GPR141Q7Z602 305 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 NARS2Q96I59 477 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 RUVBL2Q9Y230 463 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 SUPT7LO94864 414 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 NNMTP40261 264 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 TRAF2Q12933 501 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 ITPRIPL1Q6GPH6 555 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 PROM2Q8N271 834 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 MFN2O95140 757 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 VHLP40337 213 aa12.88□□□□□ -0.35
ABCA3-201ENST00000301732 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-201ENST00000301732 JAK3P52333 1124 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms