RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PI4K2BG5E9Z4 385 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 MGAMO43451 1857 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 KIF1CO43896 1103 aaKnown RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 COILP38432 576 aaPredicted RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 RAPGEF5Q92565 580 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 ZDHHC18Q9NUE0 388 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 R3HDM2Q9Y2K5 976 aaKnown RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 ASB14A6NK59 587 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 MYCNP04198 464 aaPredicted RBP23.25■■□□□ 1.31
TPM4-201ENST00000300933 CHRNA3P32297 505 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 VPS41P49754 854 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 ZFYVE27Q5T4F4 411 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 ZDHHC24Q6UX98 284 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 BRI3BPQ8WY22 251 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 SIP14410 1827 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 SCTRP47872 440 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 PTP4A2Q12974 167 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 WDR72Q3MJ13 1102 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 WLSQ5T9L3 541 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 CHADLQ6NUI6 762 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 CPLX4Q7Z7G2 160 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 PRUNE1Q86TP1 453 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 CACNA2D3Q8IZS8 1091 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 RNF25Q96BH1 459 aaPredicted RBP23.25■■□□□ 1.31
TPM4-201ENST00000300933 LRRC45Q96CN5 670 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 SGSM3Q96HU1 749 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 MS4A4AQ96JQ5 239 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 FAM81BQ96LP2 452 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 GRHL1Q9NZI5 618 aa23.25■■□□□ 1.31
TPM4-201ENST00000300933 MAGOHP61326 146 aaKnown RBP23.24■■□□□ 1.31
TPM4-201ENST00000300933 ZNF792Q3KQV3 632 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 SGO2Q562F6 1265 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 KCNN1Q92952 543 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 XYLT2Q9H1B5 865 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 MTUS1Q9ULD2 1270 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 RPSAP08865 295 aaKnown RBP23.24■■□□□ 1.31
TPM4-201ENST00000300933 CD19P15391 556 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 PROZP22891 400 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 PPP2R2AP63151 447 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 TFDP1Q14186 410 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 LIN9Q5TKA1 542 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 DPH6Q7L8W6 267 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 DPP9Q86TI2 863 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 DDX27Q96GQ7 796 aaKnown RBP23.24■■□□□ 1.31
TPM4-201ENST00000300933 NIF3L1Q9GZT8 377 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 C2orf40Q9H1Z8 148 aa23.24■■□□□ 1.31
TPM4-201ENST00000300933 AVENQ9NQS1 362 aaPredicted RBP23.24■■□□□ 1.31
TPM4-201ENST00000300933 SMIM23A6NLE4 172 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 LACTBL1A8MY62 500 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 SHBGP04278 402 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 RALAP11233 206 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 BYSLQ13895 437 aaKnown RBP23.23■■□□□ 1.31
TPM4-201ENST00000300933 DHX34Q14147 1143 aaKnown RBP23.23■■□□□ 1.31
TPM4-201ENST00000300933 SGSM1Q2NKQ1 1148 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 LRIG3Q6UXM1 1119 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 CCDC25Q86WR0 208 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 MDM1Q8TC05 714 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 MORC4Q8TE76 937 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 MIEF2Q96C03 454 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 DNAJC17Q9NVM6 304 aaKnown RBP23.23■■□□□ 1.31
TPM4-201ENST00000300933 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.23■■□□□ 1.31
TPM4-201ENST00000300933 SNAI1O95863 264 aaPredicted RBP23.23■■□□□ 1.31
TPM4-201ENST00000300933 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 WDTC1Q8N5D0 677 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 CXCL16Q9H2A7 254 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 RPF1Q9H9Y2 349 aaKnown RBP23.23■■□□□ 1.31
TPM4-201ENST00000300933 HMGXB4Q9UGU5 601 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 CNTN6Q9UQ52 1028 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 IVNS1ABPQ9Y6Y0 642 aa23.23■■□□□ 1.31
TPM4-201ENST00000300933 PROSCO94903 275 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 STAG3L1P0CL83 205 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 ASPAP45381 313 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 ZNF132P52740 706 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 ADCY2Q08462 1091 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 PPP1R7Q15435 360 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 KAZNQ674X7 775 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 TBC1D31Q96DN5 1066 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 MCEEQ96PE7 176 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 PCYOX1Q9UHG3 505 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 SIX4Q9UIU6 781 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 PNMA3Q9UL41 463 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 F8VP50 259 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 TNNC2P02585 160 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 JADE1Q6IE81 842 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 NLRP7Q8WX94 980 aa23.22■■□□□ 1.31
TPM4-201ENST00000300933 FAM187AA6NFU0 413 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 ADCY6O43306 1168 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 GAS2O43903 313 aaKnown RBP23.21■■□□□ 1.31
TPM4-201ENST00000300933 ITGBL1O95965 494 aaPredicted RBP23.21■■□□□ 1.31
TPM4-201ENST00000300933 ITGB3P05106 788 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 KRT10P13645 584 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 KRT71Q3SY84 523 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 TXNRD3NBQ6F5E7 133 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 RUFY4Q6ZNE9 571 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 UBR7Q8N806 425 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 C1orf127Q8N9H9 656 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 TACO1Q9BSH4 297 aaKnown RBP23.21■■□□□ 1.31
TPM4-201ENST00000300933 RASAL2Q9UJF2 1139 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 GOLGA8SH3BPF8 625 aa23.21■■□□□ 1.31
TPM4-201ENST00000300933 GH1P01241 217 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms