RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CFHP08603 1231 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 HSPA8P11142 646 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 PBKQ96KB5 322 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 KIAA1257Q9ULG3 409 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 ARVCFO00192 962 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 DNM1LO00429 736 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 KCNK3O14649 394 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 CKBP12277 381 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 SKIP12755 728 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 SSTR3P32745 418 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 DNA2P51530 1060 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 WHAMMQ8TF30 809 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 HES6Q96HZ4 224 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 SELENOOQ9BVL4 669 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 NT5C1AQ9BXI3 368 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 LHX5Q9H2C1 402 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.27
HERPUD1-201ENST00000300302 BRCA2P51587 3418 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 PPEF2O14830 753 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 ZNF623O75123 536 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 CALB1P05937 261 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 VDRP11473 427 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 RRM1P23921 792 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 CDH5P33151 784 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 NDST1P52848 882 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 SV2CQ496J9 727 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 ZNF572Q7Z3I7 529 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 MRPL10Q7Z7H8 261 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 HEXIM2Q96MH2 286 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 ZSWIM1Q9BR11 485 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 C11orf70Q9BRQ4 267 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
HERPUD1-201ENST00000300302 KPNA7A9QM74 516 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 MIF4GDA9UHW6 222 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 PTGESO14684 152 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 MMP8P22894 467 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 LRPAP1P30533 357 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 TAF6P49848 677 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 ITIH3Q06033 890 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 MESDQ14696 234 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 MMS22LQ6ZRQ5 1243 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 ANKRD7Q92527 254 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 PGBD4Q96DM1 585 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 ZFP42Q96MM3 310 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 RNF19AQ9NV58 838 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 GDAP2Q9NXN4 497 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 HMGXB4Q9UGU5 601 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 ALG6Q9Y672 507 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 A0A0U1RQF3 1178 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 THP07101 528 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 MLH1P40692 756 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 LBX1P52954 281 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 DSC3Q14574 896 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 SGO2Q562F6 1265 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 TWNKQ96RR1 684 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 UBN1Q9NPG3 1134 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 PAK6Q9NQU5 681 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 CHORDC1Q9UHD1 332 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-201ENST00000300302 TMEM110-MUSTN1A8MSY1 372 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 CCL5P13501 91 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 SOX4Q06945 474 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 STILQ15468 1287 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 CNGA2Q16280 664 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 PTPROQ16827 1216 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 UNC93AQ86WB7 457 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 ERICH1Q86X53 443 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 UBL4BQ8N7F7 174 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 MSANTD4Q8NCY6 345 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 DEFB118Q96PH6 123 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 GAD1Q99259 594 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 ADAM2Q99965 735 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 ANAPC7Q9UJX3 599 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 STRIP2Q9ULQ0 834 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 SCN1AP35498 2009 aa16.68■□□□□ 0.26
HERPUD1-201ENST00000300302 ARL5CA6NH57 179 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 MGEA5O60502 916 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 HSPA1AP0DMV8 641 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 HSPA1BP0DMV9 641 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 PTP4A2Q12974 167 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 ORC1Q13415 861 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 PLEKHA7Q6IQ23 1121 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 MRPL45Q9BRJ2 306 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 OSBPL7Q9BZF2 842 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 RNF208Q9H0X6 261 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 WNT8AQ9H1J5 351 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms