RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CYFIP1Q7L576 1253 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 MCF2L2Q86YR7 1114 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 C4orf19Q8IY42 314 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 FAM81AQ8TBF8 368 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 INPP5DQ92835 1189 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 ART4Q93070 314 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 GRAMD1AQ96CP6 724 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 PDCD2LQ9BRP1 358 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 DENND2DQ9H6A0 471 aaPredicted RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 TMEM8AQ9HCN3 771 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 TBC1D22BQ9NU19 505 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 CHKBQ9Y259 395 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 WDR64B1ANS9 1081 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 TP73O15350 636 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 PLA2G6O60733 806 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 TAC1P20366 129 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 SESN3P58005 492 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 BAATQ14032 418 aaPredicted RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 WASHC2DQ5SRD0 308 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 SCARA3Q6AZY7 606 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 PPP1R12CQ9BZL4 782 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 HSPA6P17066 643 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 ZNF449Q6P9G9 518 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 SEPT14Q6ZU15 432 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 TRMT10CQ7L0Y3 403 aaKnown RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 MAP4K3Q8IVH8 894 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 SLC7A6OSQ96CW6 309 aaPredicted RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 TRAPPC9Q96Q05 1148 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 LRRC37BQ96QE4 947 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 PXMP2Q9NR77 195 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 AAASQ9NRG9 546 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
UBAP1-201ENST00000297661 ZNFX1Q9P2E3 1918 aaKnown RBP16.47■□□□□ 0.23
UBAP1-201ENST00000297661 FOXN2P32314 431 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 ACOT2P49753 483 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 CALCOCO2Q13137 446 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
UBAP1-201ENST00000297661 RCN2Q14257 317 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 CLUL1Q15846 466 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 LRRC23Q53EV4 343 aaPredicted RBP16.46■□□□□ 0.23
UBAP1-201ENST00000297661 SWSAP1Q6NVH7 229 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 TEPSINQ96N21 525 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 LRCH1Q9Y2L9 728 aa16.46■□□□□ 0.23
UBAP1-201ENST00000297661 SMAPO00193 183 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 MTA2O94776 668 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 GPC3P51654 580 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 ARHGEF18Q6ZSZ5 1173 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 ATG4CQ96DT6 458 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 CDCA5Q96FF9 252 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 DCLRE1BQ9H816 532 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 NKIRAS1Q9NYS0 192 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 USTQ9Y2C2 406 aa16.46■□□□□ 0.22
UBAP1-201ENST00000297661 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 LYPLA2O95372 231 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 T-ENOLP0DO92 83 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 YARSP54577 528 aaKnown RBP16.45■□□□□ 0.22
UBAP1-201ENST00000297661 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
UBAP1-201ENST00000297661 TBK1Q9UHD2 729 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 SEPT9Q9UHD8 586 aaPredicted RBP16.45■□□□□ 0.22
UBAP1-201ENST00000297661 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 TBC1D12O60347 775 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 GSTA2P09210 222 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 VHLP40337 213 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 STRN3Q13033 797 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 DYNC1I2Q13409 638 aaKnown RBP16.45■□□□□ 0.22
UBAP1-201ENST00000297661 TCEAL1Q15170 157 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 CYP1B1Q16678 543 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 KYNUQ16719 465 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 SEZ6Q53EL9 994 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 NIPA1Q7RTP0 329 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 MAIP1Q8WWC4 291 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 ST6GALNAC4Q9H4F1 302 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 UVRAGQ9P2Y5 699 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 STOML1Q9UBI4 398 aa16.45■□□□□ 0.22
UBAP1-201ENST00000297661 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 SIGLEC16A6NMB1 481 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 WDR46O15213 610 aaKnown RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 CELF2O95319 508 aaKnown RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 CBX6O95503 412 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 ITGBL1O95965 494 aaPredicted RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 GRM1Q13255 1194 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 NLRX1Q86UT6 975 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 APOBEC3FQ8IUX4 373 aaKnown RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 CYP4X1Q8N118 509 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 IWS1Q96ST2 819 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 C11orf70Q9BRQ4 267 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 UBE2OQ9C0C9 1292 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms