RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SPOUT1Q5T280 376 aaKnown RBP19.01■□□□□ 0.63
CCDC78-201ENST00000293889 E4F1Q66K89 784 aaPredicted RBP19.01■□□□□ 0.63
CCDC78-201ENST00000293889 DSTYKQ6XUX3 929 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
CCDC78-201ENST00000293889 SP7Q8TDD2 431 aaPredicted RBP19.01■□□□□ 0.63
CCDC78-201ENST00000293889 COLEC11Q9BWP8 271 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 NKX2-4Q9H2Z4 354 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 CISHQ9NSE2 258 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 ABHD10Q9NUJ1 306 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 MARCH5Q9NX47 278 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 MSRAQ9UJ68 235 aa19.01■□□□□ 0.63
CCDC78-201ENST00000293889 HUS1O60921 280 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 TADA2AO75478 443 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 SOX5P35711 763 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 USP8P40818 1118 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 STAT1P42224 750 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 ALDH7A1P49419 539 aaKnown RBP19■□□□□ 0.63
CCDC78-201ENST00000293889 SFMBT2Q5VUG0 894 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 SPRED2Q7Z698 418 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 FAM71AQ8IYT1 594 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 MRPL45Q9BRJ2 306 aaKnown RBP19■□□□□ 0.63
CCDC78-201ENST00000293889 NUCKS1Q9H1E3 243 aaKnown RBP19■□□□□ 0.63
CCDC78-201ENST00000293889 L1RE1Q9UN81 338 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 KRT5P13647 590 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 KCNT2Q6UVM3 1135 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 TMEM173Q86WV6 379 aaPredicted RBP19■□□□□ 0.63
CCDC78-201ENST00000293889 TOP6BLQ8N6T0 577 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 APPL2Q8NEU8 664 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 SYN2Q92777 582 aaPredicted RBP19■□□□□ 0.63
CCDC78-201ENST00000293889 TIFAQ96CG3 184 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 SUSD3Q96L08 255 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 C16orf45Q96MC5 204 aaPredicted RBP19■□□□□ 0.63
CCDC78-201ENST00000293889 PANX2Q96RD6 677 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 AIPL1Q9NZN9 384 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 ADAM28Q9UKQ2 775 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 CNTN6Q9UQ52 1028 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 PCDHB4Q9Y5E5 795 aa19■□□□□ 0.63
CCDC78-201ENST00000293889 LINC01553A4QN01 128 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 M0QZQ0 153 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 GFPT2O94808 682 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 YWHAEP62258 255 aaKnown RBP18.99■□□□□ 0.63
CCDC78-201ENST00000293889 ARID5AQ03989 594 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 WSCD1Q658N2 575 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 TMEM270Q6UE05 265 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 DPH6Q7L8W6 267 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 PDCL2Q8N4E4 241 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 FIBCD1Q8N539 461 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 BCL7CQ8WUZ0 217 aaPredicted RBP18.99■□□□□ 0.63
CCDC78-201ENST00000293889 KBTBD7Q8WVZ9 684 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 ZNF558Q96NG5 402 aa18.99■□□□□ 0.63
CCDC78-201ENST00000293889 CYP26A1O43174 497 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 TACC1O75410 805 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 LINC00271P0C7V0 271 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 LAG3P18627 525 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 HNRNPH3P31942 346 aaKnown RBP18.98■□□□□ 0.63
CCDC78-201ENST00000293889 TAP1Q03518 808 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 INCA1Q0VD86 236 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 ASIC2Q16515 512 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 TSR1Q2NL82 804 aaKnown RBP18.98■□□□□ 0.63
CCDC78-201ENST00000293889 WDR59Q6PJI9 974 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 IRF2BP2Q7Z5L9 587 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 ADGRF2Q8IZF7 708 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 COLGALT1Q8NBJ5 622 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 HMGXB4Q9UGU5 601 aa18.98■□□□□ 0.63
CCDC78-201ENST00000293889 BARX2Q9UMQ3 279 aaPredicted RBP18.98■□□□□ 0.63
CCDC78-201ENST00000293889 TIMM13Q9Y5L4 95 aaPredicted RBP18.98■□□□□ 0.63
CCDC78-201ENST00000293889 CILPO75339 1184 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 ZNF132P52740 706 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 PTPN14Q15678 1187 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 RBBP8NLQ8NC74 664 aaPredicted RBP18.97■□□□□ 0.63
CCDC78-201ENST00000293889 CCDC112Q8NEF3 446 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 WHAMMQ8TF30 809 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 TSC1Q92574 1164 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 GPR62Q9BZJ7 368 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 FAM124BQ9H5Z6 455 aaPredicted RBP18.97■□□□□ 0.63
CCDC78-201ENST00000293889 PCDHB8Q9UN66 801 aa18.97■□□□□ 0.63
CCDC78-201ENST00000293889 TRAPPC3O43617 180 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 CYP11A1P05108 521 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 FAM163BP0C2L3 166 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 ODC1P11926 461 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 FERP16591 822 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 WARSP23381 471 aaKnown RBP18.96■□□□□ 0.63
CCDC78-201ENST00000293889 NDST1P52848 882 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 MEA1Q16626 185 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 ZNF394Q53GI3 561 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 PPP2R2DQ66LE6 453 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 OSTM1Q86WC4 334 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 SLC39A11Q8N1S5 342 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 TTC39CQ8N584 583 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 OR6B3Q8NGW1 331 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 CLP1Q92989 425 aaKnown RBP18.96■□□□□ 0.63
CCDC78-201ENST00000293889 IGSF21Q96ID5 467 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 TWNKQ96RR1 684 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 TTYH1Q9H313 450 aaPredicted RBP18.96■□□□□ 0.63
CCDC78-201ENST00000293889 SLC28A3Q9HAS3 691 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 ACP6Q9NPH0 428 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 ZNHIT6Q9NWK9 470 aaKnown RBP18.96■□□□□ 0.63
CCDC78-201ENST00000293889 NME7Q9Y5B8 376 aa18.96■□□□□ 0.63
CCDC78-201ENST00000293889 MYO9BQ13459 2157 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms