RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 XPOTO43592 962 aaKnown RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 N4BP1O75113 896 aaKnown RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 RFPL2O75678 378 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 SEC24AO95486 1093 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 GLUD1P00367 558 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 SPATA31D3P0C874 917 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 ATF2P15336 505 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 HOXA9P31269 272 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 PMS1P54277 932 aaKnown RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 UBE2HP62256 183 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 ROR1Q01973 937 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 CREMQ03060 361 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 ENPEPQ07075 957 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 ZNF658Q5TYW1 1059 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 SPATA31D4Q6ZUB0 917 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 LRRTM3Q86VH5 581 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 CEP57Q86XR8 500 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 WDR49Q8IV35 697 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 ADSSL1Q8N142 457 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 LRRC52Q8N7C0 313 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 KREMEN2Q8NCW0 462 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 GOLGA5Q8TBA6 731 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 IPO9Q96P70 1041 aaKnown RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 PHF7Q9BWX1 381 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 PRKD2Q9BZL6 878 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 POMKQ9H5K3 350 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 LMBRD1Q9NUN5 540 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 EXOC1Q9NV70 894 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 NME7Q9Y5B8 376 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 TIMM13Q9Y5L4 95 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-201ENST00000288344 CDY1Q9Y6F8 540 aa9.89□□□□□ -0.83
HMGN1-201ENST00000288344 TECTAO75443 2155 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 CCDC195A0A1B0GUA6 201 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 PI4K2BG5E9Z4 385 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 NRG2O14511 850 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-201ENST00000288344 AKAP3O75969 853 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 NR3C1P04150 777 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 WEE2P0C1S8 567 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 DLG4P78352 724 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 GPR17Q13304 367 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 MORC3Q14149 939 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 SURF1Q15526 300 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 DUOXA2Q1HG44 320 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 SOWAHAQ2M3V2 549 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 FOXR2Q6PJQ5 311 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 HS2ST1Q7LGA3 356 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 TRAPPC11Q7Z392 1133 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 TCEAL8Q8IYN2 117 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 GJD3Q8N144 294 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 APPL2Q8NEU8 664 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 OR10T2Q8NGX3 314 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 TMEM209Q96SK2 561 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 LRRC3Q9BY71 257 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 OXCT2Q9BYC2 517 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-201ENST00000288344 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 VRTNQ9H8Y1 702 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 SFXN1Q9H9B4 322 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 WDR6Q9NNW5 1121 aaKnown RBP9.88□□□□□ -0.83
HMGN1-201ENST00000288344 ZDHHC7Q9NXF8 308 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 MAN1B1Q9UKM7 699 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 ITGA11Q9UKX5 1188 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 MAPK8IP1Q9UQF2 711 aa9.88□□□□□ -0.83
HMGN1-201ENST00000288344 LRRIQ3A6PVS8 624 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 TNFRSF10AO00220 468 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 IKBKBO14920 756 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 PRPF40AO75400 957 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 VNN1O95497 513 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 ITGB3P05106 788 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 HNRNPA1P09651 372 aaKnown RBP eCLIP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 FAM163BP0C2L3 166 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 POLR2BP30876 1174 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 MCM4P33991 863 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 ANP32AP39687 249 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 TAF6P49848 677 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 CYP2J2P51589 502 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 EDRF1Q3B7T1 1238 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 RARS2Q5T160 578 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 WSCD1Q658N2 575 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 TPGS2Q68CL5 300 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 LMBRD2Q68DH5 695 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 ANKRD40Q6AI12 368 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 RNF19BQ6ZMZ0 732 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 DPH6Q7L8W6 267 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 OSTM1Q86WC4 334 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 CSGALNACT2Q8N6G5 542 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 CACTINQ8WUQ7 758 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 KBTBD7Q8WVZ9 684 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 NECTIN4Q96NY8 510 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 CGRRF1Q99675 332 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 ARID3AQ99856 593 aa9.87□□□□□ -0.83
HMGN1-201ENST00000288344 DUSP9Q99956 384 aaKnown RBP9.87□□□□□ -0.83
HMGN1-201ENST00000288344 APOL5Q9BWW9 433 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms