RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 UBN1Q9NPG3 1134 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 AAASQ9NRG9 546 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 ATP11BQ9Y2G3 1177 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 NR2E3Q9Y5X4 410 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 KLHL33A6NCF5 533 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 FSCN2O14926 492 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 CABYRO75952 493 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 NPTXRO95502 500 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 TTC4O95801 387 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 MMP3P08254 477 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 MYL3P08590 195 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 ABHD2P08910 425 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 ARHGAP4P98171 946 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 CALCOCO2Q13137 446 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 PTK6Q13882 451 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 TCERG1LQ5VWI1 586 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 GJB7Q6PEY0 223 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 NLRX1Q86UT6 975 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 DNAAF5Q86Y56 855 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 DHX37Q8IY37 1157 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 ZDHHC14Q8IZN3 488 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 GPRASP2Q96D09 838 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 CDC42EP4Q9H3Q1 356 aaKnown RBP10.95□□□□□ -0.66
UPF3B-201ENST00000276201 TLE6Q9H808 572 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 EURLQ9NYK6 297 aa10.95□□□□□ -0.66
UPF3B-201ENST00000276201 HIP1RO75146 1068 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 TBCAO75347 108 aaKnown RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 ECEL1O95672 775 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 LMNAP02545 664 aaKnown RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 CYP1A2P05177 515 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 CALB2P22676 271 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 PSMC6P62333 389 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 LAMC2Q13753 1193 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 NUGGCQ68CJ6 796 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 CGB2Q6NT52 195 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 POTEGQ6S5H5 508 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 STXBP4Q6ZWJ1 553 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 APBB1IPQ7Z5R6 666 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 PPTC7Q8NI37 304 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 CYP2W1Q8TAV3 490 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 KCND2Q9NZV8 630 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 PCDH10Q9P2E7 1040 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 DBR1Q9UK59 544 aaKnown RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 DOCK5Q9H7D0 1870 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 MROH7Q68CQ1 1323 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 TP73O15350 636 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 ACADSP16219 412 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 FGFR4P22455 802 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 IFNAR2P48551 515 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 CDK7P50613 346 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 TLE2Q04725 743 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 ZNF211Q13398 564 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 MTMR1Q13613 665 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 PTPROQ16827 1216 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 BRDTQ58F21 947 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 EP400NLQ6ZTU2 488 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 SLC43A3Q8NBI5 491 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 BBOF1Q8ND07 529 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 LMO3Q8TAP4 145 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 ZFAND2BQ8WV99 257 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 SPATA33Q96N06 139 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 MXRA8Q9BRK3 442 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 MTG1Q9BT17 334 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 PLVAPQ9BX97 442 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 TUFT1Q9NNX1 390 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
UPF3B-201ENST00000276201 ZMYND8Q9ULU4 1186 aaPredicted RBP10.94□□□□□ -0.66
UPF3B-201ENST00000276201 SCN10AQ9Y5Y9 1956 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 MAPK13O15264 365 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 PQBP1O60828 265 aaKnown RBP10.93□□□□□ -0.66
UPF3B-201ENST00000276201 ATP9AO75110 1047 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 CYP3A4P08684 503 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 LINGO3P0C6S8 592 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 HOXD8P13378 290 aaPredicted RBP10.93□□□□□ -0.66
UPF3B-201ENST00000276201 KCNA2P16389 499 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 TAC1P20366 129 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 ATP6V1C1P21283 382 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 ABL2P42684 1182 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 STAT4Q14765 748 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 RASA2Q15283 850 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 TAF11Q15544 211 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 HSDL1Q3SXM5 330 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 CEP55Q53EZ4 464 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 TDRPQ86YL5 185 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.93□□□□□ -0.66
UPF3B-201ENST00000276201 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 GRK7Q8WTQ7 553 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 STK32AQ8WU08 396 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 TGS1Q96RS0 853 aaKnown RBP10.93□□□□□ -0.66
UPF3B-201ENST00000276201 PPCSQ9HAB8 311 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 TELO2Q9Y4R8 837 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 USH1CQ9Y6N9 552 aa10.93□□□□□ -0.66
UPF3B-201ENST00000276201 FAM86B1E9PN63 330 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 ARVCFO00192 962 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 KPNA6O60684 536 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 PEX11AO75192 247 aa10.92□□□□□ -0.66
UPF3B-201ENST00000276201 CDH16O75309 829 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms