RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 ZCWPW2Q504Y3 356 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 RCOR2Q8IZ40 523 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 RDM1Q8NG50 284 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 SPATA18Q8TC71 538 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 ATXN7L3BQ96GX2 97 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 TRABDQ9H4I3 376 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 PRDM4Q9UKN5 801 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 FIS1Q9Y3D6 152 aa15.1■□□□□ 0.01
TMEM47-201ENST00000275954 EIF4E1BA6NMX2 242 aaKnown RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 COPEO14579 308 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 KCNN4O15554 427 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 AGTP01019 485 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 GARTP22102 1010 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 NUMBP49757 651 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 SREBF2Q12772 1141 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 TMEM132DQ14C87 1099 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 BEST2Q8NFU1 509 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 METTL5Q9NRN9 209 aaKnown RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 COL20A1Q9P218 1284 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 LCMT1Q9UIC8 334 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 SCN11AQ9UI33 1791 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 ASB14A6NK59 587 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 HOXD10P28358 340 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 CLK2P49760 499 aaKnown RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 PTENP60484 403 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 ROR1Q01973 937 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 HYIQ5T013 277 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 SCFD2Q8WU76 684 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 AGAP3Q96P47 875 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 RNF208Q9H0X6 261 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 CISHQ9NSE2 258 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 C5P01031 1676 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 A0A0A6YYK5 440 aaPredicted RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 HSPA9P38646 679 aaKnown RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 SESN2P58004 480 aaPredicted RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 ARMCX2Q7L311 632 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 FAM71DQ8N9W8 422 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 DEPDC1BQ8WUY9 529 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 RAPGEF5Q92565 580 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 SIK2Q9H0K1 926 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 ETNK1Q9HBU6 452 aa15.09■□□□□ 0.01
TMEM47-201ENST00000275954 KLHL8Q9P2G9 620 aaPredicted RBP15.09■□□□□ 0.01
TMEM47-201ENST00000275954 KIAA0391O15091 583 aaKnown RBP15.08■□□□□ 0.01
TMEM47-201ENST00000275954 FAM107AO95990 144 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 CXCL8P10145 99 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 RFC5P40937 340 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 RPL21P46778 160 aaKnown RBP15.08■□□□□ 0.01
TMEM47-201ENST00000275954 TMC2Q8TDI7 906 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 ZNF606Q8WXB4 792 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 CAVIN3Q969G5 261 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 CAPNS2Q96L46 248 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 TMEM121Q9BTD3 319 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 CDC42EP4Q9H3Q1 356 aaKnown RBP15.08■□□□□ 0.01
TMEM47-201ENST00000275954 TMBIM4Q9HC24 238 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 SETD4Q9NVD3 440 aa15.08■□□□□ 0.01
TMEM47-201ENST00000275954 IQANK1A0A1B0GTG1 560 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 KRT37O76014 449 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 NAMPTP43490 491 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 CXCL17Q6UXB2 119 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 ATP11CQ8NB49 1132 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 ZSWIM2Q8NEG5 633 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 ALG3Q92685 438 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 HPDLQ96IR7 371 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 RAB3IPQ96QF0 476 aaPredicted RBP15.08■□□□□ 0
TMEM47-201ENST00000275954 IFT122Q9HBG6 1241 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 AP3M2P53677 418 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
TMEM47-201ENST00000275954 MUM1Q2TAK8 710 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 C3orf62Q6ZUJ4 267 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 ANO5Q75V66 913 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 TRMT10CQ7L0Y3 403 aaKnown RBP15.08■□□□□ 0
TMEM47-201ENST00000275954 ARHGAP24Q8N264 748 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 PDCD7Q8N8D1 485 aaKnown RBP15.08■□□□□ 0
TMEM47-201ENST00000275954 TMEM161BQ8NDZ6 487 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 MCUQ8NE86 351 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 NSMCE1Q8WV22 266 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 GCOM2Q9BZD3 368 aaPredicted RBP15.08■□□□□ 0
TMEM47-201ENST00000275954 HAUS2Q9NVX0 235 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 ERAP1Q9NZ08 941 aa15.08■□□□□ 0
TMEM47-201ENST00000275954 GJB1P08034 283 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 IFI35P80217 286 aaPredicted RBP15.07■□□□□ 0
TMEM47-201ENST00000275954 MRPS9P82933 396 aaKnown RBP15.07■□□□□ 0
TMEM47-201ENST00000275954 TEX2Q8IWB9 1127 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 LRRC34Q8IZ02 419 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 CPB2Q96IY4 423 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 C10orf88Q9H8K7 445 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 CHST7Q9NS84 486 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
TMEM47-201ENST00000275954 AP1B1Q10567 949 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 MCOLN2Q8IZK6 566 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 KIF2BQ8N4N8 673 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
TMEM47-201ENST00000275954 GPATCH2LQ9NWQ4 482 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 PPARGC1AQ9UBK2 798 aaKnown RBP15.07■□□□□ 0
TMEM47-201ENST00000275954 SSX2IPQ9Y2D8 614 aa15.07■□□□□ 0
TMEM47-201ENST00000275954 SNED1Q8TER0 1413 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms