RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 RASSF2P50749 326 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 LMNB2Q03252 620 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 CCDC142Q17RM4 750 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 TMEM270Q6UE05 265 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 TEX9Q8N6V9 391 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 RFWD2Q8NHY2 731 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 BICD1Q96G01 975 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 TIPINQ9BVW5 301 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 MRPL47Q9HD33 250 aaKnown RBP25.08■■□□□ 1.61
RETREG2-201ENST00000273048 SENP1Q9P0U3 644 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 KANSL3Q9P2N6 904 aa25.08■■□□□ 1.61
RETREG2-201ENST00000273048 ZNF536O15090 1300 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 HLA-DRAP01903 254 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 PSMC4P43686 418 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 GPX6P59796 221 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 WASHC2DQ5SRD0 308 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 CLNKQ7Z7G1 428 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 CDAN1Q8IWY9 1227 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 CPXCR1Q8N123 301 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 LARGE2Q8N3Y3 721 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 KLF6Q99612 283 aaPredicted RBP25.08■■□□□ 1.6
RETREG2-201ENST00000273048 TMEM121Q9BTD3 319 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 ALG13Q9NP73 1137 aaKnown RBP25.08■■□□□ 1.6
RETREG2-201ENST00000273048 PSMC3IPQ9P2W1 217 aaPredicted RBP25.08■■□□□ 1.6
RETREG2-201ENST00000273048 TCEAL9Q9UHQ7 104 aa25.08■■□□□ 1.6
RETREG2-201ENST00000273048 HERC5Q9UII4 1024 aaKnown RBP25.08■■□□□ 1.6
RETREG2-201ENST00000273048 GOLGA8RI6L899 631 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 ALOX15BO15296 676 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 MYCLP12524 364 aaPredicted RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 CTCFP49711 727 aaPredicted RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 AOC3Q16853 763 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 CTC1Q2NKJ3 1217 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 WDR72Q3MJ13 1102 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 KHDC1Q4VXA5 237 aaKnown RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 BRDTQ58F21 947 aaPredicted RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 SLC45A4Q5BKX6 768 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 WDR44Q5JSH3 913 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 RNASEH2BQ5TBB1 312 aaKnown RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 TXNRD3NBQ6F5E7 133 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 PLEKHA7Q6IQ23 1121 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 C15orf39Q6ZRI6 1047 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 CLEC4DQ8WXI8 215 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 IVNS1ABPQ9Y6Y0 642 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 C2CD2LO14523 706 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 TRAFD1O14545 582 aaPredicted RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 TNNI1P19237 187 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 ACO1P21399 889 aaKnown RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 GNA15P30679 374 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 TDRD10Q5VZ19 366 aaKnown RBP25.07■■□□□ 1.6
RETREG2-201ENST00000273048 FAM160B2Q86V87 743 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 C10orf88Q9H8K7 445 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 PCDHB4Q9Y5E5 795 aa25.07■■□□□ 1.6
RETREG2-201ENST00000273048 PTPRJQ12913 1337 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 ZC3H11AO75152 810 aaKnown RBP eCLIP25.06■■□□□ 1.6
RETREG2-201ENST00000273048 MARK3P27448 753 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 SSTR1P30872 391 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 PIK3CAP42336 1068 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 ABRAQ8N0Z2 381 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 TAB3Q8N5C8 712 aaPredicted RBP25.06■■□□□ 1.6
RETREG2-201ENST00000273048 FEZF2Q8TBJ5 459 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 BPIFB4P59827 614 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 FKBP1AP62942 108 aaKnown RBP25.06■■□□□ 1.6
RETREG2-201ENST00000273048 PLCB3Q01970 1234 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 TFDP1Q14186 410 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 MORF4L2Q15014 288 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 FYB2Q5VWT5 728 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 CENPUQ71F23 418 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 CADM1Q9BY67 442 aaKnown RBP25.06■■□□□ 1.6
RETREG2-201ENST00000273048 APOBEC3GQ9HC16 384 aaKnown RBP25.06■■□□□ 1.6
RETREG2-201ENST00000273048 TBC1D22BQ9NU19 505 aa25.06■■□□□ 1.6
RETREG2-201ENST00000273048 SPDYE5A6NIY4 337 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 ICAM1P05362 532 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 DSTYKQ6XUX3 929 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 NIPA1Q7RTP0 329 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 APBB1IPQ7Z5R6 666 aaPredicted RBP25.05■■□□□ 1.6
RETREG2-201ENST00000273048 DNAJC9Q8WXX5 260 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 TAAR1Q96RJ0 339 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 FEM1BQ9UK73 627 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 CLUHO75153 1309 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 SGK1O00141 431 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 MAP3K13O43283 966 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 TJP3O95049 919 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 CAP2P40123 477 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 CETN2P41208 172 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 LMNTD2Q8IXW0 634 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 RCOR2Q8IZ40 523 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 SENP7Q9BQF6 1050 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 SLC17A7Q9P2U7 560 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 SLC24A2Q9UI40 661 aa25.05■■□□□ 1.6
RETREG2-201ENST00000273048 A0A0G2JND7 137 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 F8VP50 259 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 ZNF252P-AS1Q0IIN9 211 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 C4orf50Q6ZRC1 276 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 TAS1R3Q7RTX0 852 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 TCP10LQ8TDR4 215 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 PRR11Q96HE9 360 aaPredicted RBP25.04■■□□□ 1.6
RETREG2-201ENST00000273048 SYT15Q9BQS2 421 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 TLE6Q9H808 572 aa25.04■■□□□ 1.6
RETREG2-201ENST00000273048 ARL8BQ9NVJ2 186 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms