RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TTC25Q96NG3 672 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 TBC1D22BQ9NU19 505 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 TELO2Q9Y4R8 837 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 LRRC42Q9Y546 428 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 WDR72Q3MJ13 1102 aa29■■■□□ 2.23
CBX4-201ENST00000269397 RGS9BPQ6ZS82 235 aa29■■■□□ 2.23
CBX4-201ENST00000269397 ZNF677Q86XU0 584 aa29■■■□□ 2.23
CBX4-201ENST00000269397 ABRAQ8N0Z2 381 aa29■■■□□ 2.23
CBX4-201ENST00000269397 RFWD2Q8NHY2 731 aa29■■■□□ 2.23
CBX4-201ENST00000269397 FNBP1Q96RU3 617 aa29■■■□□ 2.23
CBX4-201ENST00000269397 APOBEC3GQ9HC16 384 aaKnown RBP29■■■□□ 2.23
CBX4-201ENST00000269397 ZFATQ9P243 1243 aa29■■■□□ 2.23
CBX4-201ENST00000269397 F8VP50 259 aa29■■■□□ 2.23
CBX4-201ENST00000269397 SGK1O00141 431 aa29■■■□□ 2.23
CBX4-201ENST00000269397 ACO1P21399 889 aaKnown RBP29■■■□□ 2.23
CBX4-201ENST00000269397 EAPPQ56P03 285 aaPredicted RBP29■■■□□ 2.23
CBX4-201ENST00000269397 SYTL5Q8TDW5 730 aaPredicted RBP29■■■□□ 2.23
CBX4-201ENST00000269397 GPX6P59796 221 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 TFDP1Q14186 410 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 PLEKHA7Q6IQ23 1121 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 ARMC2Q8NEN0 867 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 FEZF2Q8TBJ5 459 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 MIPEPQ99797 713 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 TIPINQ9BVW5 301 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 EME2A4GXA9 379 aaPredicted RBP28.99■■■□□ 2.23
CBX4-201ENST00000269397 LMNB2Q03252 620 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 C15orf39Q6ZRI6 1047 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 TAS1R3Q7RTX0 852 aa28.99■■■□□ 2.23
CBX4-201ENST00000269397 PSMC3IPQ9P2W1 217 aaPredicted RBP28.99■■■□□ 2.23
CBX4-201ENST00000269397 SCAF8Q9UPN6 1271 aaKnown RBP28.99■■■□□ 2.23
CBX4-201ENST00000269397 WDR64B1ANS9 1081 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 PPP1R12AO14974 1030 aaPredicted RBP28.98■■■□□ 2.23
CBX4-201ENST00000269397 NLRP11P59045 1033 aaKnown RBP28.98■■■□□ 2.23
CBX4-201ENST00000269397 BPIFB4P59827 614 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 FKBP1AP62942 108 aaKnown RBP28.98■■■□□ 2.23
CBX4-201ENST00000269397 DYNLT1P63172 113 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 RNASEH2BQ5TBB1 312 aaKnown RBP28.98■■■□□ 2.23
CBX4-201ENST00000269397 SENP7Q9BQF6 1050 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 FOXP3Q9BZS1 431 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 TMOD2Q9NZR1 351 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 DPPA5A6NC42 116 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 A6NHS1 94 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 VNN1O95497 513 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 CETN2P41208 172 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 PTGER2P43116 358 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 TUBP50607 506 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 CYLDQ9NQC7 956 aa28.98■■■□□ 2.23
CBX4-201ENST00000269397 A0A0G2JND7 137 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 ALOX15BO15296 676 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 TJP3O95049 919 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 MMP10P09238 476 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 RPS6P62753 249 aaKnown RBP28.97■■■□□ 2.23
CBX4-201ENST00000269397 CENPUQ71F23 418 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 NIPA1Q7RTP0 329 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 CLNKQ7Z7G1 428 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 TMEM39BQ9GZU3 492 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 KANSL3Q9P2N6 904 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 THSD7AQ9UPZ6 1657 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 ZNF862O60290 1169 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 ZC3H11AO75152 810 aaKnown RBP eCLIP28.97■■■□□ 2.23
CBX4-201ENST00000269397 RASSF2P50749 326 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 ZNF252P-AS1Q0IIN9 211 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 PGM5Q15124 567 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 ZACNQ401N2 412 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 KHDC1Q4VXA5 237 aaKnown RBP28.97■■■□□ 2.23
CBX4-201ENST00000269397 FAM182AQ5T1J6 154 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 APBB1IPQ7Z5R6 666 aaPredicted RBP28.97■■■□□ 2.23
CBX4-201ENST00000269397 ASAP3Q8TDY4 903 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 SPIRE2Q8WWL2 714 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 ANKEF1Q9NU02 776 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 SLC17A7Q9P2U7 560 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 GABBR1Q9UBS5 961 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 CUL2Q13617 745 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 SEPT7Q16181 437 aaKnown RBP28.97■■■□□ 2.23
CBX4-201ENST00000269397 MSS51Q4VC12 460 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 CEP128Q6ZU80 1094 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 RCOR2Q8IZ40 523 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 RBBP8NLQ8NC74 664 aaPredicted RBP28.97■■■□□ 2.23
CBX4-201ENST00000269397 ZNF483Q8TF39 744 aaPredicted RBP28.97■■■□□ 2.23
CBX4-201ENST00000269397 MCEEQ96PE7 176 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 SENP1Q9P0U3 644 aa28.97■■■□□ 2.23
CBX4-201ENST00000269397 CLUHO75153 1309 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 LRRD1A4D1F6 860 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 CFAP69A5D8W1 941 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 PTPN4P29074 926 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 MORF4L2Q15014 288 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 ANKRD22Q5VYY1 191 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 SPOCD1Q6ZMY3 1216 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 SEPT12Q8IYM1 358 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 TCP10LQ8TDR4 215 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 PARVAQ9NVD7 372 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 LIN7AO14910 233 aaPredicted RBP28.96■■■□□ 2.23
CBX4-201ENST00000269397 GLRA2P23416 452 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 CTC1Q2NKJ3 1217 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 ZBTB41Q5SVQ8 909 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 FYB2Q5VWT5 728 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 DSTYKQ6XUX3 929 aa28.96■■■□□ 2.23
CBX4-201ENST00000269397 PRR11Q96HE9 360 aaPredicted RBP28.96■■■□□ 2.23
CBX4-201ENST00000269397 GJD4Q96KN9 370 aaPredicted RBP28.96■■■□□ 2.23
CBX4-201ENST00000269397 SCINQ9Y6U3 715 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms