RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 COBLO75128 1261 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 DCTN3O75935 186 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 CALB1P05937 261 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 PGK2P07205 417 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 SDHBP21912 280 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 EXOC3L4Q17RC7 722 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ATF7IP2Q5U623 682 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ZNF746Q6NUN9 644 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 RRAGAQ7L523 313 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 GPD1LQ8N335 351 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 KCTD17Q8N5Z5 321 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 U2AF1L4Q8WU68 220 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 OMDQ99983 421 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 PLEKHA5Q9HAU0 1116 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 ZMYM5Q9UJ78 669 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 USP20Q9Y2K6 914 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ARIH1Q9Y4X5 557 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 EPN1Q9Y6I3 576 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 C1QTNF3-AMACRE9PGA6 284 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 RTN3O95197 1032 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 AFPP02771 609 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 GHRP10912 638 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 PTPRAP18433 802 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 MTHFRP42898 656 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 CHSY1Q86X52 802 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 KCTD6Q8NC69 237 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 KLRG1Q96E93 195 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 LXNQ9BS40 222 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 PCIF1Q9H4Z3 704 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 EXO5Q9H790 373 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ETAA1Q9NY74 926 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ABI3Q9P2A4 366 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 FAM198AQ9UFP1 575 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 MID2Q9UJV3 735 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ZNF229Q9UJW7 825 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 FBXO2Q9UK22 296 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 TBC1D3BA6NDS4 549 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 E5RI56 91 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 H3BRB1 525 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 M0QYV0 167 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 DIAPH2O60879 1101 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 HNRNPH1P31943 449 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 YWHABP31946 246 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 TOB2Q14106 344 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 CCNG2Q16589 344 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 MMEL1Q495T6 779 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 NFRKBQ6P4R8 1299 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 ZNF410Q86VK4 478 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 RIOX2Q8IUF8 465 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 APLFQ8IW19 511 aaPredicted RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 MCOLN3Q8TDD5 553 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 INTS2Q9H0H0 1204 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 BLZF1Q9H2G9 400 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 TUT1Q9H6E5 874 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 SENP1Q9P0U3 644 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 AGO2Q9UKV8 859 aaKnown RBP8.2□□□□□ -1.1
USP3-201ENST00000268049 MTMR6Q9Y217 621 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 LTBP3Q9NS15 1303 aa8.2□□□□□ -1.1
USP3-201ENST00000268049 AP3B1O00203 1094 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 PSMD3O43242 534 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 B3GAT3O94766 335 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 NR2F2P24468 414 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 CDC25CP30307 473 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 DPP6P42658 865 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 LHX1P48742 406 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 MRPS35P82673 323 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 MKRN4PQ13434 485 aaPredicted RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 FAM46CQ5VWP2 391 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 METTL7BQ6UX53 244 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 NLRP14Q86W24 1093 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 XXYLT1Q8NBI6 393 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 LZICQ8WZA0 190 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 SMG7Q92540 1137 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 CATSPERBQ9H7T0 1116 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 GMNCA6NCL1 334 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 F5H5T6 163 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 FZD9O00144 591 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 MEIS1O00470 390 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 BUB1O43683 1085 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ADH1CP00326 375 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 EEF1GP26641 437 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 SERPINB3P29508 390 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 CDC27P30260 824 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 SHMT1P34896 483 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ADCY8P40145 1251 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 EIF3BP55884 814 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 CORO7P57737 925 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 GRSF1Q12849 480 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP3-201ENST00000268049 PLCL1Q15111 1095 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 PCBP1Q15365 356 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP3-201ENST00000268049 GRIK4Q16099 956 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 USP41Q3LFD5 358 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 BROXQ5VW32 411 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 STOX1Q6ZVD7 989 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 MOB2Q70IA6 237 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms