RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 SLC18A1P54219 525 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
BEST3-201ENST00000266661 MGAT5Q09328 741 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 SF3A3Q12874 501 aaKnown RBP eCLIP13.17□□□□□ -0.3
BEST3-201ENST00000266661 TMEM132BQ14DG7 1078 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 MTERF2Q49AM1 385 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
BEST3-201ENST00000266661 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 ZNF365Q70YC5 407 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 SPATA21Q7Z572 469 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 MGARPQ8TDB4 240 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 ZNF606Q8WXB4 792 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 TMEM143Q96AN5 459 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 C9orf72Q96LT7 481 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 NIFKQ9BYG3 293 aaKnown RBP13.17□□□□□ -0.3
BEST3-201ENST00000266661 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 RBAKQ9NYW8 714 aaPredicted RBP13.17□□□□□ -0.3
BEST3-201ENST00000266661 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
BEST3-201ENST00000266661 ARL2BPQ9Y2Y0 163 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 DOCK5Q9H7D0 1870 aa13.17□□□□□ -0.3
BEST3-201ENST00000266661 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
BEST3-201ENST00000266661 LCTP09848 1927 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 TMEM88BA6NKF7 163 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 RPL7AP62424 266 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 OGDHQ02218 1023 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 MCL1Q07820 350 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 ACVR2BQ13705 512 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 RASA2Q15283 850 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 TARBP2Q15633 366 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 OASLQ15646 514 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 FAM133BQ5BKY9 247 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 NUGGCQ68CJ6 796 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 MFSD7Q6UXD7 560 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 ASRGL1Q7L266 308 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 ALLCQ8N6M5 410 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 ANKRD42Q8N9B4 389 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 CNKSR2Q8WXI2 1034 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.3
BEST3-201ENST00000266661 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 TARS2Q9BW92 718 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 DNPEPQ9ULA0 475 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 CTDP1Q9Y5B0 961 aaPredicted RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 DOCK1Q14185 1865 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 LOC285556D6RIA3 1793 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 ASMTLO95671 621 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 OATP04181 439 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 CDH5P33151 784 aaPredicted RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 HUNKP57058 714 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 LMNB2Q03252 620 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 STRN3Q13033 797 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 MTFR1Q15390 333 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 P3H1Q32P28 736 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 RGS9BPQ6ZS82 235 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 WDTC1Q8N5D0 677 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 FITM2Q8N6M3 262 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 GBP7Q8N8V2 638 aaPredicted RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 NKD2Q969F2 451 aaPredicted RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 PLCD4Q9BRC7 762 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 MLXIPLQ9NP71 852 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 KCNK9Q9NPC2 374 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 GEMIN8Q9NWZ8 242 aaKnown RBP13.16□□□□□ -0.3
BEST3-201ENST00000266661 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
BEST3-201ENST00000266661 PHIPQ8WWQ0 1821 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 K7ERI5 159 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 ALOX15BO15296 676 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 ASS1P00966 412 aaKnown RBP13.15□□□□□ -0.3
BEST3-201ENST00000266661 CST3P01034 146 aaPredicted RBP13.15□□□□□ -0.3
BEST3-201ENST00000266661 KRT10P13645 584 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 PTPRAP18433 802 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 SSTR3P32745 418 aaPredicted RBP13.15□□□□□ -0.3
BEST3-201ENST00000266661 COPS2P61201 443 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 KCNJ2P63252 427 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 NCOA4Q13772 614 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 PPP1R21Q6ZMI0 780 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 SPOCD1Q6ZMY3 1216 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 ARHGEF18Q6ZSZ5 1173 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 SEPT14Q6ZU15 432 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
BEST3-201ENST00000266661 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 C2orf69Q8N8R5 385 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 ZNF280CQ8ND82 737 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 CCHCR1Q8TD31 782 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms