RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 USH1CQ9Y6N9 552 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 WDR46O15213 610 aaKnown RBP20.43■□□□□ 0.86
SCARB1-201ENST00000261693 CBX6O95503 412 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 FGFR1P11362 822 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 PDIA2Q13087 525 aaKnown RBP20.43■□□□□ 0.86
SCARB1-201ENST00000261693 ANKRD20A2Q5SQ80 823 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 ANKRD20A1Q5TYW2 823 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 ANKRD20A3Q5VUR7 823 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 CCDC60Q8IWA6 550 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-201ENST00000261693 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 MAB21L3Q8N8X9 362 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 TMEM143Q96AN5 459 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 SLC5A4Q9NY91 659 aa20.43■□□□□ 0.86
SCARB1-201ENST00000261693 RBAKQ9NYW8 714 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-201ENST00000261693 EIF4E1BA6NMX2 242 aaKnown RBP20.42■□□□□ 0.86
SCARB1-201ENST00000261693 SGK1O00141 431 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 MAGEB2O15479 319 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 PRPF4O43172 522 aaKnown RBP eCLIP20.42■□□□□ 0.866e-7■■□□□ 12.4
SCARB1-201ENST00000261693 DGAT1O75907 488 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 TJP3O95049 919 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 HARSP12081 509 aaKnown RBP20.42■□□□□ 0.86
SCARB1-201ENST00000261693 YARSP54577 528 aaKnown RBP20.42■□□□□ 0.86
SCARB1-201ENST00000261693 CLDN10P78369 228 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 PRKCEQ02156 737 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 GHRHRQ02643 423 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 ZNF252P-AS1Q0IIN9 211 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 NR1H3Q13133 447 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 EFTUD2Q15029 972 aaKnown RBP eCLIP20.42■□□□□ 0.864e-7■■■■□ 26.1
SCARB1-201ENST00000261693 OR5B17Q8NGF7 314 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 ATP6V0A1Q93050 837 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 MAK16Q9BXY0 300 aaKnown RBP20.42■□□□□ 0.86
SCARB1-201ENST00000261693 CYP26B1Q9NR63 512 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 IP6K2Q9UHH9 426 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 WDR91A4D1P6 747 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 PDK4Q16654 411 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 WDR72Q3MJ13 1102 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 TRIM72Q6ZMU5 477 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 MCPH1Q8NEM0 835 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 TTC25Q96NG3 672 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 UBN1Q9NPG3 1134 aa20.42■□□□□ 0.86
SCARB1-201ENST00000261693 EDF1O60869 148 aaKnown RBP20.41■□□□□ 0.86
SCARB1-201ENST00000261693 KRT4P19013 534 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 DYNLT1P63172 113 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 OGDHQ02218 1023 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 ZNF394Q53GI3 561 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 HHATQ5VTY9 493 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 SPOCD1Q6ZMY3 1216 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 RBM41Q96IZ5 413 aaKnown RBP20.41■□□□□ 0.86
SCARB1-201ENST00000261693 VCPIP1Q96JH7 1222 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 GMLQ99445 158 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 FOXP3Q9BZS1 431 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 LRMDAQ9H2I8 198 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 C12orf65Q9H3J6 166 aaKnown RBP20.41■□□□□ 0.86
SCARB1-201ENST00000261693 PDLIM7Q9NR12 457 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 ARID2Q68CP9 1835 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 RGPD3A6NKT7 1758 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-201ENST00000261693 RGPD4Q7Z3J3 1758 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 LRRD1A4D1F6 860 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 NR3C2P08235 984 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 C1QBPQ07021 282 aaKnown RBP20.41■□□□□ 0.86
SCARB1-201ENST00000261693 LVRNQ6Q4G3 990 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 ZNF606Q8WXB4 792 aa20.41■□□□□ 0.86
SCARB1-201ENST00000261693 RNASEH2BQ5TBB1 312 aaKnown RBP20.4■□□□□ 0.86
SCARB1-201ENST00000261693 DCUN1D2Q6PH85 259 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 CEP128Q6ZU80 1094 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 ZNF277Q9NRM2 450 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-201ENST00000261693 SMG5Q9UPR3 1016 aaKnown RBP20.4■□□□□ 0.86
SCARB1-201ENST00000261693 BRWD3Q6RI45 1802 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 TMEM191CA6NGB0 347 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 ZBED4O75132 1171 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 NEBLO76041 1014 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 TMEM191BP0C7N4 346 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 T-ENOLP0DO92 83 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 VSIG10LQ86VR7 867 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 TDRPQ86YL5 185 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 LARGE2Q8N3Y3 721 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 NPHS2Q9NP85 383 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 LRRIQ4A6NIV6 560 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 GOLGA8RI6L899 631 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 RGS20O76081 388 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 KCNA2P16389 499 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 GM2AP17900 193 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 MMP8P22894 467 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 EPHB2P29323 1055 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 SSTR1P30872 391 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 GPX6P59796 221 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 MTMR2Q13614 643 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 MORF4L2Q15014 288 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 CENPUQ71F23 418 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 OTOAQ7RTW8 1153 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 LONP2Q86WA8 852 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 C10orf82Q8WW14 230 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 KLF6Q99612 283 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-201ENST00000261693 FAM167BQ9BTA0 163 aa20.4■□□□□ 0.86
SCARB1-201ENST00000261693 TARS2Q9BW92 718 aaKnown RBP20.4■□□□□ 0.86
SCARB1-201ENST00000261693 ALOX15BO15296 676 aa20.39■□□□□ 0.85
SCARB1-201ENST00000261693 TYROBPO43914 113 aa20.39■□□□□ 0.85
SCARB1-201ENST00000261693 PSAPP07602 524 aa20.39■□□□□ 0.85
SCARB1-201ENST00000261693 CCND2P30279 289 aa20.39■□□□□ 0.85
SCARB1-201ENST00000261693 ALDH3A1P30838 453 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms