RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 MSTO1Q9BUK6 570 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 SLC5A4Q9NY91 659 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 PRKAG3Q9UGI9 489 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 AGO2Q9UKV8 859 aaKnown RBP13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ZNF541Q9H0D2 1346 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 AVILO75366 819 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ASMTLO95671 621 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ICAM1P05362 532 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 CD48P09326 243 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 CCNG2Q16589 344 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 PLEKHG4Q58EX7 1191 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 CCDC60Q8IWA6 550 aaPredicted RBP13.95□□□□□ -0.18
PGBD1-201ENST00000259883 TCP10LQ8TDR4 215 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ZBTB10Q96DT7 871 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 SYNCQ9H7C4 482 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ENTPD3O75355 529 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 FAM155BO75949 473 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 MARK3P27448 753 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 TNFSF9P41273 254 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 NOMO3P69849 1222 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 PRKCEQ02156 737 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 TAF5Q15542 800 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 FNBP1LQ5T0N5 605 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 MON1BQ7L1V2 547 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 CNKSR1Q969H4 720 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
PGBD1-201ENST00000259883 IWS1Q96ST2 819 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
PGBD1-201ENST00000259883 ZNF395Q9H8N7 513 aaPredicted RBP13.95□□□□□ -0.18
PGBD1-201ENST00000259883 FEM1BQ9UK73 627 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 USH1CQ9Y6N9 552 aa13.95□□□□□ -0.18
PGBD1-201ENST00000259883 LIASO43766 372 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CST3P01034 146 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CTCFP49711 727 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 TUBP50607 506 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 YWHAGP61981 247 aaKnown RBP eCLIP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 TFAMQ00059 246 aaKnown RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CUL2Q13617 745 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CDO1Q16878 200 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CRELD2Q6UXH1 353 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 DSTYKQ6XUX3 929 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 USP37Q86T82 979 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 FAM71DQ8N9W8 422 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 C7orf43Q8WVR3 580 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 ZNF75CPQ92670 426 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CFAP36Q96G28 342 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 RAB3IPQ96QF0 476 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 TRIM56Q9BRZ2 755 aaKnown RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 HEY2Q9UBP5 337 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CEP350Q5VT06 3117 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CST8O60676 142 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CSDE1O75534 798 aaKnown RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 GRAP2O75791 330 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 VNN1O95497 513 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 APBA3O96018 575 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 MAPTP10636 758 aaKnown RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 HIF1AQ16665 826 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 ISLR2Q6UXK2 745 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 ASRGL1Q7L266 308 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 TAS1R3Q7RTX0 852 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 FEZF2Q8TBJ5 459 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 ACTL9Q8TC94 416 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 MAIP1Q8WWC4 291 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 CYTH2Q99418 400 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 PDCD2LQ9BRP1 358 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 HERC5Q9UII4 1024 aaKnown RBP13.94□□□□□ -0.18
PGBD1-201ENST00000259883 PCDHA10Q9Y5I2 948 aa13.94□□□□□ -0.18
PGBD1-201ENST00000259883 ATP8B3O60423 1300 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 E2F8A0AVK6 867 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 DNALI1O14645 258 aaPredicted RBP13.93□□□□□ -0.18
PGBD1-201ENST00000259883 SRGAP2CP0DJJ0 459 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 GLRA2P23416 452 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
PGBD1-201ENST00000259883 TRAF1Q13077 416 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 RIPK1Q13546 671 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 THEMIS2Q5TEJ8 643 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 VPS52Q8N1B4 723 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 ZCCHC9Q8N567 271 aaKnown RBP13.93□□□□□ -0.18
PGBD1-201ENST00000259883 FBXO36Q8NEA4 188 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 CCHCR1Q8TD31 782 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 ZNF606Q8WXB4 792 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 RSAD2Q8WXG1 361 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 MECRQ9BV79 373 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 SLC13A1Q9BZW2 595 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 MTMR12Q9C0I1 747 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 XPNPEP1Q9NQW7 623 aa13.93□□□□□ -0.18
PGBD1-201ENST00000259883 K7ERI5 159 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms