RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 APBB2Q92870 758 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 ZSWIM1Q9BR11 485 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 THAP2Q9H0W7 228 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 HMGXB4Q9UGU5 601 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 PCDHGC5Q9Y5F6 944 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 NCANO14594 1321 aa10.08□□□□□ -0.8
NIP7-202ENST00000254941 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
NIP7-202ENST00000254941 BUB1O43683 1085 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 CFHP08603 1231 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 ABCB4P21439 1286 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
NIP7-202ENST00000254941 NDST1P52848 882 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 NOMO3P69849 1222 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 GPC5P78333 572 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 GRIK3Q13003 919 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 TCEAL1Q15170 157 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
NIP7-202ENST00000254941 SOWAHAQ2M3V2 549 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 PPP1R2P3Q6NXS1 205 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 SEPT8Q92599 483 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 CYFIP2Q96F07 1278 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 TMEM176AQ96HP8 235 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 PAWRQ96IZ0 340 aaKnown RBP10.07□□□□□ -0.8
NIP7-202ENST00000254941 ALS2CR12Q96Q35 445 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 TWNKQ96RR1 684 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 NAPGQ99747 312 aaPredicted RBP10.07□□□□□ -0.8
NIP7-202ENST00000254941 NT5C1AQ9BXI3 368 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 ELOVL4Q9GZR5 314 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 WNT8AQ9H1J5 351 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 PDCL3Q9H2J4 239 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 PUF60Q9UHX1 559 aaKnown RBP10.07□□□□□ -0.8
NIP7-202ENST00000254941 TBX21Q9UL17 535 aa10.07□□□□□ -0.8
NIP7-202ENST00000254941 ENPP3O14638 875 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 MED7O43513 233 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 GALR2O43603 387 aaPredicted RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 LSM8O95777 96 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 POMCP01189 267 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CXCL10P02778 98 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CDH5P33151 784 aaPredicted RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 CLCNKBP51801 687 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 HADHBP55084 474 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 NAP1L1P55209 391 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 UPP1Q16831 310 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 UNC93AQ86WB7 457 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 SLC35G2Q8TBE7 412 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CPA5Q8WXQ8 436 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 MRPL45Q9BRJ2 306 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 ZNF518BQ9C0D4 1074 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 C11orf49Q9H6J7 331 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 ELAC1Q9H777 363 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 L2HGDHQ9H9P8 463 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 TMEM161AQ9NX61 479 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 GTF3C4Q9UKN8 822 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 KIAA1257Q9ULG3 409 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 JRKLQ9Y4A0 524 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 TSC2P49815 1807 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 PODXLO00592 558 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 HUS1O60921 280 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 URI1O94763 535 aaPredicted RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 VDRP11473 427 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CD19P15391 556 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 IBSPP21815 317 aaPredicted RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 NOP2P46087 812 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 AARSP49588 968 aaKnown RBP eCLIP10.06□□□□□ -0.8
NIP7-202ENST00000254941 TUSC3Q13454 348 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CLLU1OSQ5K130 101 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 NAA35Q5VZE5 725 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 MON1BQ7L1V2 547 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 PHF13Q86YI8 300 aaPredicted RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 PASD1Q8IV76 773 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 RHOT2Q8IXI1 618 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 MCOLN2Q8IZK6 566 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 TOP6BLQ8N6T0 577 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 APPL2Q8NEU8 664 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 TPCN2Q8NHX9 752 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 KBTBD7Q8WVZ9 684 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 ARHGEF26Q96DR7 871 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 DDX27Q96GQ7 796 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 SCLYQ96I15 445 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 VCPIP1Q96JH7 1222 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CALR3Q96L12 384 aaKnown RBP10.06□□□□□ -0.8
NIP7-202ENST00000254941 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 LHX5Q9H2C1 402 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 CACNG4Q9UBN1 327 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
NIP7-202ENST00000254941 LTBP2Q14767 1821 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 GRID2IPA4D2P6 1211 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CASTOR2A6NHX0 329 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 ENC1O14682 589 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 PALMO75781 387 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 MTA2O94776 668 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CYP1A2P05177 515 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 CLTBP09497 229 aa10.05□□□□□ -0.8
NIP7-202ENST00000254941 MYBL1P10243 752 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms