RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KYAT1Q16773 422 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 SPATA1Q5VX52 437 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 ZNF852Q6ZMS4 543 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 GPBP1Q86WP2 473 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 RMDN1Q96DB5 314 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 RSPRY1Q96DX4 576 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 EPC1Q9H2F5 836 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 CHRDQ9H2X0 955 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 ZFP14Q9HCL3 533 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 ASAH2Q9NR71 780 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 SPATA6Q9NWH7 488 aaPredicted RBP11.21□□□□□ -0.61
VPS50-201ENST00000251739 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.61
VPS50-201ENST00000251739 TBX20Q9UMR3 447 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 CACNA1BQ00975 2339 aa11.21□□□□□ -0.62
VPS50-201ENST00000251739 ZNF638Q14966 1978 aaKnown RBP11.21□□□□□ -0.62
VPS50-201ENST00000251739 OR6C75A6NL08 312 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 KINO60870 393 aaKnown RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 OR4Q2P0C623 313 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 PSMC3P17980 439 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 PLCG1P19174 1290 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 VIPR2P41587 438 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 LIG4P49917 911 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 MLLT6P55198 1093 aaPredicted RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 LILRA4P59901 499 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 GRIN1Q05586 938 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 FCHO2Q0JRZ9 810 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 MYBPC2Q14324 1141 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 CYP4A22Q5TCH4 519 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 IQCEQ6IPM2 695 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 CENPPQ6IPU0 288 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 DCLK2Q8N568 766 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 ZSCAN18Q8TBC5 510 aaPredicted RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 IRF7Q92985 503 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 CDK5RAP3Q96JB5 506 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 ZNF512Q96ME7 567 aaPredicted RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 MKNK1Q9BUB5 465 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 TRMT61BQ9BVS5 477 aaKnown RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 ST6GALNAC4Q9H4F1 302 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 BRD9Q9H8M2 597 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 PARVGQ9HBI0 331 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 ZNF334Q9HCZ1 680 aaPredicted RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 ZSCAN32Q9NX65 697 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 DLL3Q9NYJ7 618 aa11.2□□□□□ -0.62
VPS50-201ENST00000251739 MRPS17Q9Y2R5 130 aaKnown RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 TIMM13Q9Y5L4 95 aaPredicted RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 KMT2BQ9UMN6 2715 aaPredicted RBP11.2□□□□□ -0.62
VPS50-201ENST00000251739 RALGAPA1Q6GYQ0 2036 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 ANO9A1A5B4 782 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 MTMR11A4FU01 709 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 K7ENM7 598 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 MAN2B1O00754 1011 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 NCAM2O15394 837 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 XPOTO43592 962 aaKnown RBP11.19□□□□□ -0.62
VPS50-201ENST00000251739 CYP11A1P05108 521 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 GJA1P17302 382 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 PAX3P23760 479 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 GTF2BQ00403 316 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 CSTF1Q05048 431 aaKnown RBP11.19□□□□□ -0.62
VPS50-201ENST00000251739 MTAPQ13126 283 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 TEAD2Q15562 447 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 OVOS1Q6IE37 1185 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 GAREM2Q75VX8 874 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 KIAA2013Q8IYS2 634 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 TTC9BQ8N6N2 239 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 RAD54LQ92698 747 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 BICD1Q96G01 975 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 IER2Q9BTL4 223 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
VPS50-201ENST00000251739 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 HSFX1Q9UBD0 423 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 DERAQ9Y315 318 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 STYXL1Q9Y6J8 313 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 PIAS3Q9Y6X2 628 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 ANAPC1Q9H1A4 1944 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 KIAA1549LQ6ZVL6 1849 aa11.19□□□□□ -0.62
VPS50-201ENST00000251739 EML5Q05BV3 1969 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 PTPRDP23468 1912 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 H3BQV1 296 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 PIRO00625 290 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 TRAK2O60296 914 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 FAM13AO94988 1023 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 BMP15O95972 392 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 NFICP08651 508 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 MYL4P12829 197 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
VPS50-201ENST00000251739 GDI1P31150 447 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 LONP1P36776 959 aaKnown RBP11.18□□□□□ -0.62
VPS50-201ENST00000251739 UBA7P41226 1012 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 DUSP4Q13115 394 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 PLD1Q13393 1074 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 MCM6Q14566 821 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
VPS50-201ENST00000251739 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 STXBP5Q5T5C0 1151 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms