RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.31
RFPL3-201ENST00000249007 WEE1P30291 646 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 GALK1P51570 392 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 DUSP4Q13115 394 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 NTRK3Q16288 839 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 CCNI2Q6ZMN8 369 aaPredicted RBP13.09□□□□□ -0.31
RFPL3-201ENST00000249007 SYT12Q8IV01 421 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 EXOC4Q96A65 974 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 SUSD3Q96L08 255 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 CRISPLD1Q9H336 500 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 TOPORSQ9NS56 1045 aaPredicted RBP13.09□□□□□ -0.31
RFPL3-201ENST00000249007 MBD1Q9UIS9 605 aaPredicted RBP13.09□□□□□ -0.31
RFPL3-201ENST00000249007 ASB3Q9Y575 518 aa13.09□□□□□ -0.31
RFPL3-201ENST00000249007 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 VNN2O95498 520 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 CFIP05156 583 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 EDN1P05305 212 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 IFNAR1P17181 557 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 MCM4P33991 863 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 PSMD2Q13200 908 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 SLC23A3Q6PIS1 610 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 KRT25Q7Z3Z0 450 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 DNAJB7Q7Z6W7 309 aaPredicted RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 DDX12PQ92771 950 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 PSMG2Q969U7 264 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 GTPBP2Q9BX10 602 aaKnown RBP13.08□□□□□ -0.32
RFPL3-201ENST00000249007 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
RFPL3-201ENST00000249007 SHROOM3Q8TF72 1996 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 PLXNB3Q9ULL4 1909 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 OPHN1O60890 802 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 OR4Q2P0C623 313 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 PLA2G2AP14555 144 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 ARSAP15289 507 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 MARCKSP29966 332 aaPredicted RBP13.07□□□□□ -0.32
RFPL3-201ENST00000249007 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
RFPL3-201ENST00000249007 PTGER3P43115 390 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 CYP4F8P98187 520 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 APBB1IPQ7Z5R6 666 aaPredicted RBP13.07□□□□□ -0.32
RFPL3-201ENST00000249007 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 DAGLBQ8NCG7 672 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 ADAMTS14Q8WXS8 1223 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 EZH1Q92800 747 aaPredicted RBP13.07□□□□□ -0.32
RFPL3-201ENST00000249007 BRF1Q92994 677 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 TBC1D32Q96NH3 1257 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 GCNAQ96QF7 691 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 UBL7Q96S82 380 aaPredicted RBP13.07□□□□□ -0.32
RFPL3-201ENST00000249007 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 PTPN13Q12923 2485 aa13.07□□□□□ -0.32
RFPL3-201ENST00000249007 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 MAP3K13O43283 966 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 C1QL1O75973 258 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 DPP6P42658 865 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 YWHAHQ04917 246 aaPredicted RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 NPY5RQ15761 445 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 ITIH5Q86UX2 942 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 CEP120Q8N960 986 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 MDGA1Q8NFP4 955 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 ZMAT2Q96NC0 199 aaKnown RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 CCDC94Q9BW85 323 aaPredicted RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 SLC27A5Q9Y2P5 690 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 ADAMTS9Q9P2N4 1935 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
RFPL3-201ENST00000249007 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
RFPL3-201ENST00000249007 TK2O00142 265 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 KIF20AO95235 890 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 FTH1P19P0C7X4 201 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CDC25CP30307 473 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 GJA4P35212 333 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 AVPR1AP37288 418 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
RFPL3-201ENST00000249007 BFSP1Q12934 665 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 GPR17Q13304 367 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 KRT32Q14532 448 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms