RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ALDH3A1P30838 453 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 SYDE1Q6ZW31 735 aaPredicted RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 CENPUQ71F23 418 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 MAK16Q9BXY0 300 aaKnown RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 BHMG1C9JSJ3 638 aaPredicted RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 PSTPIP1O43586 416 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ZC3H11AO75152 810 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 CETPP11597 493 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 STAT5BP51692 787 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 PSMC1P62191 440 aaKnown RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ATP11AP98196 1134 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 MPP2Q14168 576 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 MON1BQ7L1V2 547 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ZBTB8OSQ8IWT0 167 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 PRPF31Q8WWY3 499 aaKnown RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 SLCO1B3Q9NPD5 702 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 CST8O60676 142 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 VNN1O95497 513 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 TNNC2P02585 160 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 PKN2Q16513 984 aaKnown RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 WDR72Q3MJ13 1102 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 SCARA3Q6AZY7 606 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 TXNRD3NBQ6F5E7 133 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ZC3H18Q86VM9 953 aaKnown RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 RDM1Q8NG50 284 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 EXD1Q8NHP7 514 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ERP27Q96DN0 273 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 MAFGO15525 162 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 CALB1P05937 261 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 YWHAGP61981 247 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 FSTL1Q12841 308 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 SPARCL1Q14515 664 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 RCOR2Q8IZ40 523 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 KCTD6Q8NC69 237 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 CISHQ9NSE2 258 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
RAB3IP-201ENST00000247833 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 ATP6V1G2O95670 118 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 FDX1P10109 184 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF568Q3ZCX4 644 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 PIGWQ7Z7B1 504 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 FBXL18Q96ME1 805 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 ANKRD31Q8N7Z5 1873 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 FOCADQ5VW36 1801 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 GRAP2O75791 330 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 RGS20O76081 388 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 GJB1P08034 283 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 KRT3P12035 628 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 CDH8P55286 799 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 SP2Q02086 613 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 MAPK6Q16659 721 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 HIF1AQ16665 826 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 HADHQ16836 314 aaKnown RBP13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 DUOXA2Q1HG44 320 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 SPOCD1Q6ZMY3 1216 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 STAMBPL1Q96FJ0 436 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 CGRRF1Q99675 332 aa13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 IQCGQ9H095 443 aaKnown RBP13.3□□□□□ -0.28
RAB3IP-201ENST00000247833 H0Y3Z8 333 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 SSTR1P30872 391 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 HIRAP54198 1017 aaPredicted RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 TRAPPC12Q8WVT3 735 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 CKAP2Q8WWK9 683 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 ZBTB10Q96DT7 871 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 RSRC1Q96IZ7 334 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 RMDN2Q96LZ7 410 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 NTPCRQ9BSD7 190 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 MAP3K20Q9NYL2 800 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 A8MUI8 341 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 H7C0C1 242 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 RNF8O76064 485 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 GHRP10912 638 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 ATP5OP48047 213 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 ALDH5A1P51649 535 aaPredicted RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 COPS2P61201 443 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 OVGP1Q12889 678 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 ABHD15Q6UXT9 468 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 ANKS1BQ7Z6G8 1248 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 CEP120Q8N960 986 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms