RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ZNF394Q53GI3 561 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 PDXDC1Q6P996 788 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 PRSS55Q6UWB4 352 aaPredicted RBP21.53■■□□□ 1.04
SNRPA-201ENST00000243563 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.53■■□□□ 1.04
SNRPA-201ENST00000243563 DRC7Q8IY82 874 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 AUTS2Q8WXX7 1259 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 TMEM209Q96SK2 561 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 STK33Q9BYT3 514 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 CYP3A43Q9HB55 503 aa21.53■■□□□ 1.04
SNRPA-201ENST00000243563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.53■■□□□ 1.043e-14■■□□□ 13.1
SNRPA-201ENST00000243563 A0A1W2PQJ5 194 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 C5orf67F2Z3F1 127 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 CSPG5O95196 566 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 P4HA1P13674 534 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 NDST1P52848 882 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 VARS2Q5ST30 1063 aaKnown RBP21.52■■□□□ 1.04
SNRPA-201ENST00000243563 CACNA2D4Q7Z3S7 1137 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 DDX53Q86TM3 631 aaKnown RBP21.52■■□□□ 1.04
SNRPA-201ENST00000243563 OR10T2Q8NGX3 314 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 TGS1Q96RS0 853 aaKnown RBP21.52■■□□□ 1.04
SNRPA-201ENST00000243563 NUP58Q9BVL2 599 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 HERC2P3Q9BVR0 1158 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 MSRAQ9UJ68 235 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 PCDHB4Q9Y5E5 795 aa21.52■■□□□ 1.04
SNRPA-201ENST00000243563 ATP2C2O75185 946 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PDGFRBP09619 1106 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 TYMPP19971 482 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 RFX1P22670 979 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PPM1AP35813 382 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 ZNF132P52740 706 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 RAD23BP54727 409 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PLCB3Q01970 1234 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PPP2R2DQ66LE6 453 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 TMEM270Q6UE05 265 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 RSPO2Q6UXX9 243 aaPredicted RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 DPH6Q7L8W6 267 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 FAM71AQ8IYT1 594 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 TC2NQ8N9U0 490 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 OR6B3Q8NGW1 331 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 FAXDC2Q96IV6 333 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PDLIM2Q96JY6 352 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 CHST7Q9NS84 486 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 CNTN6Q9UQ52 1028 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PCDHGC5Q9Y5F6 944 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 TRIOBPQ9H2D6 2365 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PTPRDP23468 1912 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 GRM6O15303 877 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 CYP26A1O43174 497 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 TRAPPC3O43617 180 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 MFAP3LO75121 409 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 GFPT2O94808 682 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 SOD2P04179 222 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 KRT5P13647 590 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 CLCN1P35523 988 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 SMAD3P84022 425 aaKnown RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 CAMK1Q14012 370 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 MRPL58Q14197 206 aaKnown RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 OVOS1Q6IE37 1185 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 ENOSF1Q7L5Y1 443 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 VPS52Q8N1B4 723 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 SLC4A11Q8NBS3 891 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 RBBP8NLQ8NC74 664 aaPredicted RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 SPPL3Q8TCT6 385 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 ZSWIM1Q9BR11 485 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 DDX43Q9NXZ2 648 aaKnown RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 BARX2Q9UMQ3 279 aaPredicted RBP21.51■■□□□ 1.03
SNRPA-201ENST00000243563 STXBP5LQ9Y2K9 1186 aa21.51■■□□□ 1.03
SNRPA-201ENST00000243563 PLXNA3P51805 1871 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 SYN3O14994 580 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 PAX3P23760 479 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 KRT9P35527 623 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 SOX5P35711 763 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 USP8P40818 1118 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 PSMC1P62191 440 aaKnown RBP21.5■■□□□ 1.03
SNRPA-201ENST00000243563 PPFIBP1Q86W92 1011 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 TMEM86AQ8N2M4 240 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 SPAG5Q96R06 1193 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 TTPALQ9BTX7 342 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 EDEM3Q9BZQ6 932 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 ZBP1Q9H171 429 aa21.5■■□□□ 1.03
SNRPA-201ENST00000243563 SOX1O00570 391 aaPredicted RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 C2CD2LO14523 706 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 ADAM12O43184 909 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 OAZ2O95190 189 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 OR4Q2P0C623 313 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 RPL17P18621 184 aaKnown RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 GNL1P36915 607 aaPredicted RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 ERVFC1P60507 584 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 ZBED6P86452 979 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 YWHAHQ04917 246 aaPredicted RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 ELAVL2Q12926 359 aaKnown RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 TRIM14Q14142 442 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 USP41Q3LFD5 358 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 ACOT1Q86TX2 421 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 LNX1Q8TBB1 728 aaPredicted RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 RIN2Q8WYP3 895 aaPredicted RBP21.49■■□□□ 1.03
SNRPA-201ENST00000243563 TIFAQ96CG3 184 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 PLVAPQ9BX97 442 aa21.49■■□□□ 1.03
SNRPA-201ENST00000243563 SNX25Q9H3E2 840 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms