RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 GCNT3O95395 438 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 TAF6P49848 677 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 STARD6P59095 220 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 GRIN1Q05586 938 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 TCF15Q12870 199 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 SV2CQ496J9 727 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 SEZ6Q53EL9 994 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 LINC00301Q8NCQ3 95 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 SPATA18Q8TC71 538 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 FIZ1Q96SL8 496 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 ZFP14Q9HCL3 533 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 PANK4Q9NVE7 773 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 SIT1Q9Y3P8 196 aa13.77□□□□□ -0.21
PDZD11-201ENST00000239666 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 PIRO00625 290 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 CYP11A1P05108 521 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 TNFSF9P41273 254 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 VEPH1Q14D04 833 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 JADE1Q6IE81 842 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
PDZD11-201ENST00000239666 BRICD5Q6PL45 260 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 DCP1BQ8IZD4 617 aaKnown RBP13.76□□□□□ -0.21
PDZD11-201ENST00000239666 TMEM105Q8N8V8 129 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 GPR152Q8TDT2 470 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 RSAD2Q8WXG1 361 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 DNASE1L2Q92874 299 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 IRF7Q92985 503 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 SENP8Q96LD8 212 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 USP28Q96RU2 1077 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 CORO1BQ9BR76 489 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 STRA6Q9BX79 667 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 HAPLN2Q9GZV7 340 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
PDZD11-201ENST00000239666 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
PDZD11-201ENST00000239666 ANO9A1A5B4 782 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 FRMD3A2A2Y4 597 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 MYMKA6NI61 221 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 MAN2B1O00754 1011 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 PDGFBP01127 241 aaPredicted RBP13.75□□□□□ -0.21
PDZD11-201ENST00000239666 GLULP15104 373 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 ACOT2P49753 483 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 EPHA5P54756 1037 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 KCNC4Q03721 635 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 TAF12Q16514 161 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 ZC2HC1CQ53FD0 456 aaPredicted RBP13.75□□□□□ -0.21
PDZD11-201ENST00000239666 PARM1Q6UWI2 310 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 DTWD2Q8NBA8 298 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 ITFG1Q8TB96 612 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 SPPL2BQ8TCT7 592 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 DEPDC1BQ8WUY9 529 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 FGF14Q92915 247 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 DNAJC19Q96DA6 116 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 MSANTD3Q96H12 275 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 SPSB2Q99619 263 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 TRPV5Q9NQA5 729 aa13.75□□□□□ -0.21
PDZD11-201ENST00000239666 KANSL1LA0AUZ9 987 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 SOBPA7XYQ1 873 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 KPNA7A9QM74 516 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 ANKRD63C9JTQ0 380 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 H0Y858 1186 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 NARSO43776 548 aaKnown RBP13.74□□□□□ -0.21
PDZD11-201ENST00000239666 EXTL3O43909 919 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
PDZD11-201ENST00000239666 NPR3P17342 541 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 NBL1P41271 181 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 MLLT6P55198 1093 aaPredicted RBP13.74□□□□□ -0.21
PDZD11-201ENST00000239666 GPC5P78333 572 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 TSPY1Q01534 308 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 SPAG1Q07617 926 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 TWF1Q12792 350 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 MYO1EQ12965 1108 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 PPP2R5DQ14738 602 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 NFE2Q16621 373 aaPredicted RBP13.74□□□□□ -0.21
PDZD11-201ENST00000239666 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 ARHGAP15Q53QZ3 475 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 CNNM4Q6P4Q7 775 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 USP49Q70CQ1 688 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 DPH6Q7L8W6 267 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 RETREG3Q86VR2 466 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 TMEM86AQ8N2M4 240 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 GCNAQ96QF7 691 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 USB1Q9BQ65 265 aaKnown RBP13.74□□□□□ -0.21
PDZD11-201ENST00000239666 IER2Q9BTL4 223 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
PDZD11-201ENST00000239666 TBC1D17Q9HA65 648 aa13.74□□□□□ -0.21
PDZD11-201ENST00000239666 ITGA11Q9UKX5 1188 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms