RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.82■□□□□ 0.122e-7■■■□□ 17.9
CCDC47-201ENST00000225726 ELOVL4Q9GZR5 314 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CARD9Q9H257 536 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 MRPL47Q9HD33 250 aaKnown RBP15.82■□□□□ 0.12
CCDC47-201ENST00000225726 RBM12Q9NTZ6 932 aaKnown RBP15.82■□□□□ 0.12
CCDC47-201ENST00000225726 TTC7AQ9ULT0 858 aaPredicted RBP15.82■□□□□ 0.12
CCDC47-201ENST00000225726 BARX2Q9UMQ3 279 aaPredicted RBP15.82■□□□□ 0.12
CCDC47-201ENST00000225726 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 SMIM28A0A1B0GU29 152 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CTSHP09668 335 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CD19P15391 556 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 MMP8P22894 467 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 WDR93Q6P2C0 686 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 LHX5Q9H2C1 402 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 ANAPC7Q9UJX3 599 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CCDC151A5D8V7 595 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 FKTNO75072 461 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 ATF7P17544 494 aaPredicted RBP15.82■□□□□ 0.12
CCDC47-201ENST00000225726 MCM3P25205 808 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CTNNA2P26232 953 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 GLRA4Q5JXX5 417 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 C9orf57Q5W0N0 161 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 PLEKHA7Q6IQ23 1121 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 C1orf131Q8NDD1 294 aaKnown RBP15.82■□□□□ 0.12
CCDC47-201ENST00000225726 RUBCNQ92622 972 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CD101Q93033 1021 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 BTBD6Q96KE9 485 aa15.82■□□□□ 0.12
CCDC47-201ENST00000225726 CYP3A5P20815 502 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 PTK7Q13308 1070 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 ITGA7Q13683 1181 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 TMCO3Q6UWJ1 677 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 SLAIN1Q8ND83 568 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 TWNKQ96RR1 684 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 KLK14Q9P0G3 267 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 HMGXB4Q9UGU5 601 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 TMEM59LQ9UK28 342 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 ACLYP53396 1101 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 PRMT2P55345 433 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 CLUL1Q15846 466 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 GLE1Q53GS7 698 aaKnown RBP15.81■□□□□ 0.12
CCDC47-201ENST00000225726 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
CCDC47-201ENST00000225726 PPEF2O14830 753 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 GPR182O15218 404 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 SPOPO43791 374 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 VDRP11473 427 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 THPOP40225 353 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 DCAF12L1Q5VU92 463 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 DENND1BQ6P3S1 775 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 TSEN34Q9BSV6 310 aaKnown RBP15.81■□□□□ 0.12
CCDC47-201ENST00000225726 PARVAQ9NVD7 372 aa15.81■□□□□ 0.12
CCDC47-201ENST00000225726 MOXD2PA6NHM9 499 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 INHAP05111 366 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 CTNNA1P35221 906 aaKnown RBP15.8■□□□□ 0.12
CCDC47-201ENST00000225726 RNASE9P60153 205 aaKnown RBP15.8■□□□□ 0.12
CCDC47-201ENST00000225726 MAMLD1Q13495 774 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 ZNF560Q96MR9 790 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 KIAA1257Q9ULG3 409 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 FRMPD3Q5JV73 1810 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 CCDC66A2RUB6 948 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 PIRO00625 290 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 ERLIN1O75477 346 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 SLC1A1P43005 524 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 NDST1P52848 882 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 VSNL1P62760 191 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 C2CD6Q53TS8 623 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
CCDC47-201ENST00000225726 HACE1Q8IYU2 909 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 WDTC1Q8N5D0 677 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 HNRNPLLQ8WVV9 542 aaKnown RBP15.8■□□□□ 0.12
CCDC47-201ENST00000225726 ALG3Q92685 438 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 SAGE1Q9NXZ1 904 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 PNPLA4P41247 253 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 LLGL2Q6P1M3 1020 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 PHLDB2Q86SQ0 1253 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 ARRDC4Q8NCT1 418 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 ERVK-5Q9HDB9 667 aa15.8■□□□□ 0.12
CCDC47-201ENST00000225726 SCN1AP35498 2009 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 MYO1FO00160 1098 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 PEX5P50542 639 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 NFX1Q12986 1120 aaKnown RBP15.79■□□□□ 0.12
CCDC47-201ENST00000225726 ORC1Q13415 861 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 ERICH1Q86X53 443 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 ZNF784Q8NCA9 323 aaPredicted RBP15.79■□□□□ 0.12
CCDC47-201ENST00000225726 KRT35Q92764 455 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 NAP1L3Q99457 506 aaPredicted RBP15.79■□□□□ 0.12
CCDC47-201ENST00000225726 LRRC1Q9BTT6 524 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 NT5C1AQ9BXI3 368 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 ZNF446Q9NWS9 450 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC47-201ENST00000225726 PCDHA3Q9Y5H8 950 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 SNX9Q9Y5X1 595 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 CNGA2Q16280 664 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 SGO2Q562F6 1265 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 FAM26DQ5JW98 314 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 C8orf74Q6P047 294 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 RNPC3Q96LT9 517 aaKnown RBP15.79■□□□□ 0.12
CCDC47-201ENST00000225726 HEXIM2Q96MH2 286 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms