RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TNFAIP8L3Q5GJ75 292 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 MFSD5Q6N075 450 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 TRPM8Q7Z2W7 1104 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 KATNAL2Q8IYT4 538 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 EMC1Q8N766 993 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 NEU2Q9Y3R4 380 aa15.47■□□□□ 0.07
CNOT3-201ENST00000221232 RASA4BC9J798 803 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 ASAP2O43150 1006 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 RASA4O43374 803 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 PSTPIP1O43586 416 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 ADCY3O60266 1144 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 LDHAP00338 332 aaKnown RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 MMP8P22894 467 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 ALDH5A1P51649 535 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 NRLP54845 237 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 MCCD1P59942 119 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 PHF13Q86YI8 300 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM192Q8IY95 271 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 WDTC1Q8N5D0 677 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 EXD1Q8NHP7 514 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 SLITRK1Q96PX8 696 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 IP6K2Q9UHH9 426 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 AGAP1Q9UPQ3 857 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 SCINQ9Y6U3 715 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 KIAA1217Q5T5P2 1943 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 ZNFX1Q9P2E3 1918 aaKnown RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM191CA6NGB0 347 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 C19orf81C9J6K1 198 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 FARP2O94887 1054 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 UBOX5O94941 541 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 PECAM1P16284 738 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 TBXAS1P24557 533 aaPredicted RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 HSDL1Q3SXM5 330 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 GADL1Q6ZQY3 521 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 CROCCP2Q86T23 111 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 ERICH1Q86X53 443 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 SUGP1Q8IWZ8 645 aaKnown RBP15.46■□□□□ 0.07
CNOT3-201ENST00000221232 C4orf33Q8N1A6 199 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 KDM4CQ9H3R0 1056 aa15.46■□□□□ 0.07
CNOT3-201ENST00000221232 INO80B-WBP1J3KQ70 363 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 LIASO43766 372 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 SNX3O60493 162 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 MAN1A1P33908 653 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 IGBP1P78318 339 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 PARP9Q8IXQ6 854 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 KIF2BQ8N4N8 673 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 TBC1D31Q96DN5 1066 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 TGS1Q96RS0 853 aaKnown RBP15.46■□□□□ 0.06
CNOT3-201ENST00000221232 INO80BQ9C086 356 aaPredicted RBP15.46■□□□□ 0.06
CNOT3-201ENST00000221232 BAIAP2L1Q9UHR4 511 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 ZNF112Q9UJU3 913 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 AGTPBP1Q9UPW5 1226 aa15.46■□□□□ 0.06
CNOT3-201ENST00000221232 ADGRA2Q96PE1 1338 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 EXOC1LA0A1B0GW35 172 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 SOWAHBA6NEL2 793 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 KLRC2P26717 231 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 CETN2P41208 172 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 OAZ1P54368 228 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 DENND1BQ6P3S1 775 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 TRIM72Q6ZMU5 477 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 ZBED8Q8IZ13 594 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 SPOCK2Q92563 424 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 COPS5Q92905 334 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 PNMA3Q9UL41 463 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 LOXHD1Q8IVV2 1947 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 ARIH2O95376 493 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 ITGBL1O95965 494 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 RPS12P25398 132 aaKnown RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 RFC1P35251 1148 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 LAMTOR4Q0VGL1 99 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 SPOCD1Q6ZMY3 1216 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 SYDE1Q6ZW31 735 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 JOSD2Q8TAC2 188 aa15.45■□□□□ 0.06
CNOT3-201ENST00000221232 NSRP1Q9H0G5 558 aaKnown RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 TPX2Q9ULW0 747 aaKnown RBP15.45■□□□□ 0.06
CNOT3-201ENST00000221232 FER1L6Q2WGJ9 1857 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 TJP3O95049 919 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 ATG7O95352 703 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 ASS1P00966 412 aaKnown RBP15.44■□□□□ 0.06
CNOT3-201ENST00000221232 KRT15P19012 456 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 DUOXA2Q1HG44 320 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 RCOR2Q8IZ40 523 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 CCDC77Q9BR77 488 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 NKIRAS1Q9NYS0 192 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 TRIM33Q9UPN9 1127 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 MSCO60682 206 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 PRKCBP05771 671 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 CD48P09326 243 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 LACTBP83111 547 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-201ENST00000221232 TAF5Q15542 800 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 LACTB2Q53H82 288 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-201ENST00000221232 CCDC63Q8NA47 563 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 TMEM35BQ8NCS4 154 aa15.44■□□□□ 0.06
CNOT3-201ENST00000221232 GINM1Q9NU53 330 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms