RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 FBXO47Q5MNV8 452 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 WDR49Q8IV35 697 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 SHISA4Q96DD7 197 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ST3GAL5Q9UNP4 418 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 PASKQ96RG2 1323 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 PGRMC1O00264 195 aaKnown RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 POLE2P56282 527 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF200P98182 395 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 BTG3Q14201 252 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 CST9Q5W186 159 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 BRSK2Q8IWQ3 736 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 RNF25Q96BH1 459 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 TUBB6Q9BUF5 446 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ASB7Q9H672 318 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ASNSD1Q9NWL6 643 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 BNIP3LO60238 219 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 IFNAR2P48551 515 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 VEGFBP49765 207 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 GRB14Q14449 540 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 TATDN2Q93075 761 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 PPP2R3CQ969Q6 453 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF512Q96ME7 567 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 IRX2Q9BZI1 471 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 CHORDC1Q9UHD1 332 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 GABRQQ9UN88 632 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 SSU72P8A0A1W2PR75 194 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 SGK1O00141 431 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 STMN1P16949 149 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 DNAJB2P25686 324 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 AXLP30530 894 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 STILQ15468 1287 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 DCP1BQ8IZD4 617 aaKnown RBP9.92□□□□□ -0.82
CCDC113-201ENST00000219299 CCDC85CA6NKD9 419 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RAB27AP51159 221 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PRMT2P55345 433 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 GEN1Q17RS7 908 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ARHGAP39Q9C0H5 1083 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CDT1Q9H211 546 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PACSIN2Q9UNF0 486 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PLAGL2Q9UPG8 496 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 MAFBQ9Y5Q3 323 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PLEKP08567 350 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ODC1P11926 461 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PDGFRAP16234 1089 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ARF4P18085 180 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 EIF3BP55884 814 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 C2CD6Q53TS8 623 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RFFLQ8WZ73 363 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RTN2O75298 545 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CRCPO75575 148 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 NOVP48745 357 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 GYS2P54840 703 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 C2orf54Q08AI8 447 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF211Q13398 564 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 IKBKEQ14164 716 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RAD9BQ6WBX8 426 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF784Q8NCA9 323 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 MBOAT7Q96N66 472 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 DHX33Q9H6R0 707 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CISHQ9NSE2 258 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RNF186Q9NXI6 227 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 TNFSF13BQ9Y275 285 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RPTORQ8N122 1335 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PFDN6O15212 129 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CREB3O43889 395 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RAP1GAPP47736 663 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 SCNN1GP51170 649 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CRYBB1P53674 252 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 DRP2Q13474 957 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ARHGEF18Q6ZSZ5 1173 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 AP1M1Q9BXS5 423 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 FGFBP2Q9BYJ0 223 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 PARVAQ9NVD7 372 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 NR2E3Q9Y5X4 410 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CCDC88AQ3V6T2 1871 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 MCF2LO15068 1137 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 SART1O43290 800 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 FGGP02679 453 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 MLH1P40692 756 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CDH8P55286 799 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ARHGAP1Q07960 439 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 FAM133BQ5BKY9 247 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 OLFML2BQ68BL8 750 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 JADE1Q6IE81 842 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 CAPN12Q6ZSI9 719 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 NECAB2Q7Z6G3 386 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 RYBPQ8N488 228 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF296Q8WUU4 475 aaPredicted RBP9.91□□□□□ -0.82
CCDC113-201ENST00000219299 FAM84AQ96KN4 292 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms