RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ATP6V1B2P21281 511 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 NMD3Q96D46 503 aaKnown RBP15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 RIC8BQ9NVN3 520 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 VAV3Q9UKW4 847 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 PDE9AO76083 593 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 ZCCHC18P0CG32 403 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 FCHO2Q0JRZ9 810 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 PTK7Q13308 1070 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 TAF5Q15542 800 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 S100A13Q99584 98 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 C1orf232A0A0U1RR37 186 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 RGS20O76081 388 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 HMBSP08397 361 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 VHLP40337 213 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 MDH1P40925 334 aaKnown RBP15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 TRAF2Q12933 501 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 MTFR1Q15390 333 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 UGP2Q16851 508 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 PMF1Q6P1K2 205 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 RMDN3Q96TC7 470 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 ING3Q9NXR8 418 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 ATP1A3P13637 1013 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 MCPH1Q8NEM0 835 aa15.22■□□□□ 0.03
SPTLC2-201ENST00000216484 USP17L3A6NCW0 530 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 USP17L4A6NCW7 530 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 SLC16A4O15374 487 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 S100A1P23297 94 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 DDX39BQ13838 428 aaKnown RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 USP17L1Q7RTZ2 530 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 C4orf33Q8N1A6 199 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 H7C0S8 307 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 DUOXA2Q1HG44 320 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 SLC25A41Q8N5S1 370 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 MIEF2Q96C03 454 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 ABCB11O95342 1321 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 RNF123Q5XPI4 1314 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 CHRM3P20309 590 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 RHAGQ02094 409 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 KIRREL3Q8IZU9 778 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 TRIM51Q9BSJ1 452 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 NRDE2Q9H7Z3 1164 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 DBNDD1Q9H9R9 158 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 KLHL3Q9UH77 587 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 MEI4A8MW99 385 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF189O75820 626 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF682O95780 498 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 NPEPPSP55786 919 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 CACHD1Q5VU97 1274 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 SCFD2Q8WU76 684 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 UBXN6Q9BZV1 441 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 XDHP47989 1333 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 POLR3AO14802 1390 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 PRRG1O14668 218 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 ECDO95905 644 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 CPA2P48052 419 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 COPAP53621 1224 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 CHI3L2Q15782 390 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 SYTL1Q8IYJ3 562 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 RBBP8NLQ8NC74 664 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 USP33Q8TEY7 942 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 C18orf25Q96B23 403 aaPredicted RBP15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 ARHGEF26Q96DR7 871 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 PRRG3Q9BZD7 231 aa15.21■□□□□ 0.03
SPTLC2-201ENST00000216484 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.02
SPTLC2-201ENST00000216484 AVPR1AP37288 418 aa15.21■□□□□ 0.02
SPTLC2-201ENST00000216484 DYNLL1P63167 89 aaKnown RBP15.21■□□□□ 0.02
SPTLC2-201ENST00000216484 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.02
SPTLC2-201ENST00000216484 DSG3P32926 999 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 EIF2S3P41091 472 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 RNPC3Q96LT9 517 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 CYP4Z2PQ8N1L4 340 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 MLPHQ9BV36 600 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 WWOXQ9NZC7 414 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 RNF112Q9ULX5 631 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 ALOX12P18054 663 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 PRCPP42785 496 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 UGT3A1Q6NUS8 523 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 NT5DC4Q86YG4 428 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 ATG16L2Q8NAA4 619 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 NSL1Q96IY1 281 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TUBGCP4Q9UGJ1 667 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 ADGRA3Q8IWK6 1321 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 H2AFYO75367 372 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 RAD17O75943 681 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 AKR1B1P15121 316 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 LSM7Q9UK45 103 aaKnown RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 SLC39A10Q9ULF5 831 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TADA2AO75478 443 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 TAB1Q15750 504 aa15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 CCSAPQ6IQ19 270 aaPredicted RBP15.2■□□□□ 0.02
SPTLC2-201ENST00000216484 CDC73Q6P1J9 531 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms