RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 ADAM33Q9BZ11 813 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 FAM49BQ9NUQ9 324 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 PPP1R3GB7ZBB8 358 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 ASMTLO95671 621 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 OCM2P0CE71 109 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 OCMP0CE72 109 aaPredicted RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 GTF2H1P32780 548 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 PPP4CP60510 307 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 CYTH1Q15438 398 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 HNRNPLLQ8WVV9 542 aaKnown RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 ZCCHC11Q5TAX3 1644 aaKnown RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 RALBP11234 206 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 CYP2C9P11712 490 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 WASHC5Q12768 1159 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 TROAPQ12815 778 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 AASDHQ4L235 1098 aaPredicted RBP14.17□□□□□ -0.14
SF3A1-201ENST00000215793 LONP2Q86WA8 852 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 ENGASEQ8NFI3 743 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 ZIM3Q96PE6 472 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 CLTCL1P53675 1640 aa14.17□□□□□ -0.14
SF3A1-201ENST00000215793 AKAP10O43572 662 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 GRAP2O75791 330 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 COILP38432 576 aaPredicted RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 PTGER2P43116 358 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 DTX3LQ8TDB6 740 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 THAP11Q96EK4 314 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 ZMAT2Q96NC0 199 aaKnown RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 OLFML3Q9NRN5 406 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 AGPAT3Q9NRZ7 376 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 CDYLQ9Y232 598 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 PKP3Q9Y446 797 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 CTSHP09668 335 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 KLC1Q07866 573 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 EFCAB12Q6NXP0 572 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 SLC7A14Q8TBB6 771 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 HPDLQ96IR7 371 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 GID8Q9NWU2 228 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 SFMBT1Q9UHJ3 866 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 PTPRUQ92729 1446 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 SPDYE5A6NIY4 337 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 SRP72O76094 671 aaKnown RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 PCYT1AP49585 367 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 DMC1Q14565 340 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 SPDYE7PQ495Y7 208 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 SLC13A5Q86YT5 568 aaPredicted RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 OR2W6PQ8NHA6 318 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 E2F7Q96AV8 911 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 ADNPQ9H2P0 1102 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 RIC8BQ9NVN3 520 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 FAM107AO95990 144 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 KCNJ1P48048 391 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 ARHGEF7Q14155 803 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 KIZQ2M2Z5 673 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 PKN3Q6P5Z2 889 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 NUP93Q8N1F7 819 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 PPP1R36Q96LQ0 422 aa14.16□□□□□ -0.14
SF3A1-201ENST00000215793 FRMD8P1Q9BZ68 369 aaPredicted RBP14.16□□□□□ -0.14
SF3A1-201ENST00000215793 CCND1P24385 295 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 RFX5P48382 616 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 NLRP11P59045 1033 aaKnown RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 MOXD1Q6UVY6 613 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 LINC00523Q86TU6 105 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 PAWRQ96IZ0 340 aaKnown RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 SERPINB12Q96P63 405 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 TRPC7Q9HCX4 862 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 VPS9D1Q9Y2B5 631 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 B2RBV5 119 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 DEAF1O75398 565 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 GNL1P36915 607 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 LAMC2Q13753 1193 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 MAPRE1Q15691 268 aaKnown RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 ACAD10Q6JQN1 1059 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 LVRNQ6Q4G3 990 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 CLEC4FQ8N1N0 589 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 THTPAQ9BU02 230 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 TBX20Q9UMR3 447 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 APOA4P06727 396 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 PLA2G4AP47712 749 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 IRAK1P51617 712 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 NPEPPSP55786 919 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 PTRHD1Q6GMV3 140 aaKnown RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 NOA1Q8NC60 698 aaKnown RBP14.15□□□□□ -0.14
SF3A1-201ENST00000215793 ARMC2Q8NEN0 867 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 IL17RAQ96F46 866 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 SENP2Q9HC62 589 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 ZC4H2Q9NQZ6 224 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 TMEM161AQ9NX61 479 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 NAGPAQ9UK23 515 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 TAF6P49848 677 aa14.15□□□□□ -0.14
SF3A1-201ENST00000215793 SLC29A2Q14542 456 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms