RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZBTB16Q05516 673 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 TMEM132BQ14DG7 1078 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 C7orf43Q8WVR3 580 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 TFAP2BQ92481 460 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 LRRC19Q9H756 370 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 GLRA2P23416 452 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 ADRA1DP25100 572 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 RFC1P35251 1148 aaPredicted RBP15.92■□□□□ 0.14
EFNB1-201ENST00000204961 YWHAGP61981 247 aaKnown RBP eCLIP15.92■□□□□ 0.14
EFNB1-201ENST00000204961 LVRNQ6Q4G3 990 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 ECHDC2Q86YB7 292 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 RFX6Q8HWS3 928 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 PRPF31Q8WWY3 499 aaKnown RBP15.92■□□□□ 0.14
EFNB1-201ENST00000204961 COPS5Q92905 334 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 CFAP36Q96G28 342 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 ZNRF3Q9ULT6 936 aa15.92■□□□□ 0.14
EFNB1-201ENST00000204961 HOXA7P31268 230 aaPredicted RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 CETN2P41208 172 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 JAK3P52333 1124 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 ANGEL2Q5VTE6 544 aaKnown RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 YTHDF3Q7Z739 585 aaKnown RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 PALM2Q8IXS6 379 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 DTX3LQ8TDB6 740 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 MYLK2Q9H1R3 596 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 ZNF302Q9NR11 478 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 CFAP69A5D8W1 941 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 WDR46O15213 610 aaKnown RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 NQO1P15559 274 aaKnown RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 PIGWQ7Z7B1 504 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 VSIG10LQ86VR7 867 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 FEZF2Q8TBJ5 459 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 ACTL9Q8TC94 416 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 RSAD2Q8WXG1 361 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 SMC6Q96SB8 1091 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 SLC13A1Q9BZW2 595 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 NOMO3P69849 1222 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 AMHR2Q16671 573 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 EML3Q32P44 896 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 MSS51Q4VC12 460 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 STYK1Q6J9G0 422 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 C3orf62Q6ZUJ4 267 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 TRMT10CQ7L0Y3 403 aaKnown RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 LRRC8CQ8TDW0 803 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 PYROXD1Q8WU10 500 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 ASCC2Q9H1I8 757 aaPredicted RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 ZNF395Q9H8N7 513 aaPredicted RBP15.91■□□□□ 0.14
EFNB1-201ENST00000204961 KIAA1586Q9HCI6 787 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 GRID1Q9ULK0 1009 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 PHTF1Q9UMS5 762 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
EFNB1-201ENST00000204961 LTBP4Q8N2S1 1624 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 UBE4BO95155 1302 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 DGAT1O75907 488 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 TMEM191BP0C7N4 346 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 ATP4AP20648 1035 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 GMPSP49915 693 aaPredicted RBP15.9■□□□□ 0.14
EFNB1-201ENST00000204961 OTUD4Q01804 1114 aaKnown RBP15.9■□□□□ 0.14
EFNB1-201ENST00000204961 CGB2Q6NT52 195 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 ABRAQ8N0Z2 381 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 MAGEB5Q9BZ81 275 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 STK32BQ9NY57 414 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 C5orf60A6NFR6 353 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 EPHB2P29323 1055 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 PHKA2P46019 1235 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 NUMBP49757 651 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 TMEM62Q0P6H9 643 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 MKRN3Q13064 507 aaKnown RBP15.9■□□□□ 0.14
EFNB1-201ENST00000204961 PPP6R3Q5H9R7 873 aaPredicted RBP15.9■□□□□ 0.14
EFNB1-201ENST00000204961 PPP1R21Q6ZMI0 780 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 SULF1Q8IWU6 871 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 LPIN3Q9BQK8 851 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 MAK16Q9BXY0 300 aaKnown RBP15.9■□□□□ 0.14
EFNB1-201ENST00000204961 SHCBP1LQ9BZQ2 653 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 KDM4CQ9H3R0 1056 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 CISHQ9NSE2 258 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 DOCK5Q9H7D0 1870 aa15.9■□□□□ 0.14
EFNB1-201ENST00000204961 CDH16O75309 829 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 CLCN3P51790 818 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 DRG2P55039 364 aaKnown RBP15.89■□□□□ 0.13
EFNB1-201ENST00000204961 COPS2P61201 443 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 ZACNQ401N2 412 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 DENND1BQ6P3S1 775 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 CRELD2Q6UXH1 353 aaPredicted RBP15.89■□□□□ 0.13
EFNB1-201ENST00000204961 GRK7Q8WTQ7 553 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 ARMCX1Q9P291 453 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 SLC17A7Q9P2U7 560 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 CNOT7Q9UIV1 285 aaKnown RBP15.89■□□□□ 0.13
EFNB1-201ENST00000204961 ATRNL1Q5VV63 1379 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 TAC1P20366 129 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 RFX1P22670 979 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 GCKP35557 465 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 PSMC1P62191 440 aaKnown RBP15.89■□□□□ 0.13
EFNB1-201ENST00000204961 IL9RQ01113 521 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 ARHGEF18Q6ZSZ5 1173 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 LRRC6Q86X45 466 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 PRR11Q96HE9 360 aaPredicted RBP15.89■□□□□ 0.13
EFNB1-201ENST00000204961 MFSD14AQ96MC6 490 aa15.89■□□□□ 0.13
EFNB1-201ENST00000204961 CEP41Q9BYV8 373 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms