RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 ANAPC7Q9UJX3 599 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 RAB21Q9UL25 225 aa16.6■□□□□ 0.25
LAPTM4A-201ENST00000175091 TLR3O15455 904 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 MED7O43513 233 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 CD4P01730 458 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 CD19P15391 556 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 CYP3A5P20815 502 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 COMTP21964 271 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 CLCN6P51797 869 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 ARHGEF6Q15052 776 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 FBXO47Q5MNV8 452 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 PLEKHA7Q6IQ23 1121 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TMEM176AQ96HP8 235 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 BTBD6Q96KE9 485 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TSEN34Q9BSV6 310 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 AGO3Q9H9G7 860 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 RBM12Q9NTZ6 932 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TRMT13Q9NUP7 481 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 SCINQ9Y6U3 715 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TARSL2A2RTX5 802 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 PGRMC1O00264 195 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 PIRO00625 290 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 SOX4Q06945 474 aaPredicted RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 ORC1Q13415 861 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 WDTC1Q8N5D0 677 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 ZNF560Q96MR9 790 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 GLT1D1Q96MS3 346 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 LHX5Q9H2C1 402 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 HMX1Q9NP08 348 aaPredicted RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TMEM59LQ9UK28 342 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TTC7AQ9ULT0 858 aaPredicted RBP16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
LAPTM4A-201ENST00000175091 TMEM110-MUSTN1A8MSY1 372 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 PTGESO14684 152 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 GPR182O15218 404 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 CEP104O60308 925 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 CALB1P05937 261 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 ATF7P17544 494 aaPredicted RBP16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 YY1P25490 414 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 GRK4P32298 578 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 CTNNA1P35221 906 aaKnown RBP16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 NDST1P52848 882 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 FAM26DQ5JW98 314 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 ALG3Q92685 438 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■■■■■ 27.7
LAPTM4A-201ENST00000175091 OSBPL7Q9BZF2 842 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 TRIM7Q9C029 511 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 MRPL47Q9HD33 250 aaKnown RBP16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 RNF19AQ9NV58 838 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 SNX9Q9Y5X1 595 aa16.58■□□□□ 0.24
LAPTM4A-201ENST00000175091 TCRBV5S1A1TA0A578 114 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 CCDC151A5D8V7 595 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 CAND2O75155 1236 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 TUBBP07437 444 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 CTNNA2P26232 953 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 MARCKSL1P49006 195 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 MAMLD1Q13495 774 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 WDR93Q6P2C0 686 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 DENND1BQ6P3S1 775 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 CPNE8Q86YQ8 564 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 KRT35Q92764 455 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 PPP1R10Q96QC0 940 aaKnown RBP16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 WNT8AQ9H1J5 351 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 PADI3Q9ULW8 664 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 PTCH2Q9Y6C5 1203 aa16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
LAPTM4A-201ENST00000175091 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 MEIS3P2A8K0S8 358 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 O00370 1275 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 SPOPO43791 374 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 GHRP10912 638 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 VDRP11473 427 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 LRPAP1P30533 357 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 CD52P31358 61 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 PNPLA4P41247 253 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 VSNL1P62760 191 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 PAK2Q13177 524 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 LPIN1Q14693 890 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 BRD3Q15059 726 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 HACE1Q8IYU2 909 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 UBL4BQ8N7F7 174 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 ZFP42Q96MM3 310 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 MRPL45Q9BRJ2 306 aaKnown RBP16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 TRAIPQ9BWF2 469 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 NT5C1AQ9BXI3 368 aa16.56■□□□□ 0.24
LAPTM4A-201ENST00000175091 GOLGA2P5Q9HBQ8 144 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms