RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Cst8P32766 142 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 GsapQ3TCV3 858 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ppp1r12cQ3UMT1 782 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Grm6Q5NCH9 871 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Orai3Q6P8G8 290 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cacna2d2Q6PHS9 1154 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tbc1d22bQ80VE5 505 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Acot11Q8VHQ9 594 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ttc1Q91Z38 292 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 1700013H16RikQ9DAC5 291 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Olig1Q9JKN5 260 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Sfmbt1Q9JMD1 863 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mia3Q8BI84 1930 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pus7B7ZNL8 666 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ccdc13D3YV10 709 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ttc17E9PVB5 1198 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tlk2O55047 718 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mmp13P33435 472 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dynlt1P51807 113 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Erbb2P70424 1256 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 2700097O09RikQ6PGK3 301 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Slitrk1Q810C1 696 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pnpt1Q8K1R3 783 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Sec63Q8VHE0 760 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Polr3fQ921X6 316 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 St13Q99L47 371 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Thap12Q9CUX1 758 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 AunipE9Q6Z5 340 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dusp8O09112 663 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 E2f6O54917 272 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Stra6O70491 670 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Kmt5aQ2YDW7 349 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Shroom1Q5SX79 823 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Stip1Q60864 543 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Snx19Q6P4T1 997 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cnksr2Q80YA9 1032 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Q80ZQ3 298 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Osbpl2Q8BX94 484 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm10436L7N1Y3 520 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Nub1P54729 614 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Sash1P59808 1230 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Togaram2Q3TYG6 1002 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Capn13Q3UW68 665 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Syce2Q505B8 171 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm14685Q52KH6 695 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tas2r109Q7M707 316 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Camta2Q80Y50 1208 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 EtnpplQ8BWU8 499 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ago2Q8CJG0 860 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Sh2d5Q8JZW5 429 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Slc39a3Q99K24 317 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gps1Q99LD4 471 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tmx2Q9D710 295 aaKnown RBP12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Usp21Q9QZL6 566 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Bub1bQ9Z1S0 1052 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Crlf3Q9Z2L7 442 aa12.17□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Lrriq4A6H6A4 596 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 TroapB7ZNG4 668 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 PigrO70570 771 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 PklrP53657 574 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Zscan2Q07230 614 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Fam8a1Q3URQ4 399 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Grb10Q60760 621 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Parp6Q6P6P7 630 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Glra2Q7TNC8 452 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 N4bp3Q8C7U1 537 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Nsmce3Q9CPR8 279 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 4930519G04RikQ9CPT7 205 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ly6iQ9WU67 134 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Aldh18a1Q9Z110 795 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Diaph3Q9Z207 1171 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Spata31d1aE9QA35 1336 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dock2Q8C3J5 1828 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ttc6G3UYY4 1857 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 B020011L13RikA0A087WQI7 412 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Oog1E9Q5G7 496 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Sept7O55131 436 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 PdgfraP26618 1089 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rasgrf1P27671 1262 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 TdgP56581 421 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Atp11aP98197 1187 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 NfiaQ02780 532 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tff2Q03404 129 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mylk3Q3UIZ8 795 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Acvrl1Q61288 502 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mapk4Q6P5G0 583 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 LdhdQ7TNG8 484 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Nsun6Q7TS68 476 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 CyldQ80TQ2 952 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Chmp2bQ8BJF9 213 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 OafQ8QZR4 282 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Lman1lQ8VCD3 505 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Taf7lQ9D3R9 471 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tmem206Q9D771 350 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Subh2bvQ9D9Z7 123 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gbp2Q9Z0E6 589 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ror2Q9Z138 944 aa12.16□□□□□ -0.46
Col9a1-202ENSMUST00000088349 2210011C24RikA0A087WQ89 206 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Arhgef10lA2AWP8 1280 aa12.15□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ccdc170D3YXL0 722 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms