RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Q80WR5 230 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Thop1Q8C1A5 687 aaKnown RBP12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Unc5bQ8K1S3 945 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ushbp1Q8R370 680 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ces1Q8VCC2 565 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ttc8Q8VD72 515 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Mrpl1Q99N96 336 aaKnown RBP12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Habp4Q9JKS5 411 aaKnown RBP12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 JmyQ9QXM1 983 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 EmcnQ9R0H2 261 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ptpn4Q9WU22 926 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gm14525B1AZA0 212 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Adam15O88839 864 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 SobpQ0P5V2 864 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 MlxipQ2VPU4 917 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Tcerg1lQ3B807 590 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Fam193bQ3U2K0 892 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Fam20cQ5MJS3 579 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 P4ha1Q60715 534 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ube2q1Q7TSS2 422 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Arhgef38Q80VK6 770 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Slc51aQ8R000 340 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 CpzQ8R4V4 654 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Eif2b2Q99LD9 351 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Trpd52l3Q9CQ14 231 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Trmt112Q9DCG9 125 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Znf287Q9EQB9 759 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Nup50Q9JIH2 466 aaKnown RBP12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Pex3Q9QXY9 372 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Iqca1lA6H690 825 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Grem2O88273 168 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 ZfrO88532 1074 aaKnown RBP12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Fam178bQ24JP3 464 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gm29609Q3UU56 907 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gm732Q3V0P9 516 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ccdc154Q6RUT8 657 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ppm1lQ8BHN0 360 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gtf3c2Q8BL74 907 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 ThtpaQ8JZL3 224 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Sf3b4Q8QZY9 424 aaKnown RBP12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ap3m2Q8R2R9 418 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ttc4Q8R3H9 386 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Olfr807Q8VGI9 311 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 NpntQ91V88 561 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Lrp8Q924X6 996 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Lactb2Q99KR3 288 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Pole4Q9CQ36 118 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Mxra8Q9DBV4 442 aa12.04□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Adamts6D3Z1A5 1117 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Cdk16Q04735 496 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Caprin2Q05A80 1031 aaKnown RBP12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Akap4Q60662 849 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Capn11Q6J756 714 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Znf18Q810A1 556 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Phf20Q8BLG0 1010 aaKnown RBP12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 AsphQ8BSY0 741 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Vps50Q8CI71 964 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Clip4Q8CI96 704 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 FggQ8VCM7 436 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Pcdhb5Q91XZ5 792 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ddx28Q9CWT6 540 aaKnown RBP12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Mipol1Q9D9F8 279 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Slc12a7Q9WVL3 1083 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 C7D3YXF5 845 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 A430078G23RikE9Q7Y4 484 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Cyp4a14O35728 507 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Klf1P46099 358 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Hace1Q3U0D9 909 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gm4951Q3UED7 406 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Pdap1Q3UHX2 181 aaKnown RBP12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Elf3Q3UPW2 391 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Lrrc8bQ5DU41 803 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Fxr1Q61584 677 aaKnown RBP12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Grid1Q61627 1009 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 GmipQ6PGG2 971 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 KhnynQ80U38 671 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gm9758Q80ZT2 255 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Pkn2Q8BWW9 983 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 CenpuQ8C4M7 410 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ccdc113Q8C5T8 377 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 CnstQ8CBC4 711 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 AcppQ8CE08 381 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Bag5Q8CI32 447 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Krt79Q8VED5 531 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Bhmt2Q91WS4 363 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Slc39a3Q99K24 317 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Rab11fip1Q9D620 645 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gid8Q9D7M1 228 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 RptorQ8K4Q0 1335 aa12.03□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Lcn6A2AJB9 181 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Cyp2a22B2RXZ2 492 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Zfp780bE9Q2S6 806 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Inpp5aE9QAS7 422 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Bub1O08901 1058 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Ripk2P58801 539 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Stx2Q00262 289 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Nlrc4Q3UP24 1024 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Bend6Q6PFX2 281 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Gramd1bQ80TI0 738 aa12.02□□□□□ -0.48
Ssh1-201ENSMUST00000077689 Psmd5Q8BJY1 504 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms