RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmem117Q8BH18 514 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Synj2Q9D2G5 1434 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 A0A1Y7VIU7 259 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ass1P16460 412 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tex11Q14AT2 947 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Grid1Q61627 1009 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Amz1Q8BVF9 502 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Prr5lA2AVJ5 370 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ugt1a6bK9J7B2 531 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Vps33bP59016 617 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ugt1a6Q64435 531 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ugt1a7cQ6ZQM8 531 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Kirrel3Q8BR86 778 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Znf426Q8R1D1 550 aa12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Dis3Q9CSH3 958 aaKnown RBP12.44□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lmnb1P14733 588 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cep44Q5HZK1 386 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tdrd5Q5VCS6 1040 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Chi3l1Q61362 389 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ube2oQ6ZPJ3 1288 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Q8BGD0 127 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Golph3Q9CRA5 298 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ddx56Q9D0R4 546 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tubgcp4Q9D4F8 667 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Vmn2r5K7N788 911 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Adcy1O88444 1118 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Man1a2P39098 641 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Polr2eQ80UW8 210 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Haus7Q8BKT8 364 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Zfp655Q9CZP3 541 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pdk2Q9JK42 407 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Acsl4Q9QUJ7 711 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm28036V9GXJ1 658 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Zmym2Q9CU65 1376 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cacnb3P54285 484 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Q3UJP5 209 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Adrbk2Q3UYH7 688 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 AdigQ8R400 80 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ndufaf7Q9CWG8 436 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 CtsfQ9R013 462 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lrrc38A2VDH3 298 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Slc11a2P49282 568 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ulbp1Q8HWA3 334 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cyp3a44Q9EQW4 504 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ces1bD3Z5G7 567 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm6408J3QNG1 320 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 AurkcO88445 282 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Polr1bP70700 1135 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cdca2Q14B71 982 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Spout1Q3UHX9 385 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Them6Q80ZW2 207 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Fam32aQ9CR80 112 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Znf654Q9DAU9 571 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cdk5rap2Q8K389 1822 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 BrafP28028 804 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pcsk1P63239 753 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gspt2Q149F3 632 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 1700001J03RikQ80ZR8 219 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 SucoQ8C341 1250 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Kbtbd13Q8C828 458 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lsm7Q9CQQ8 103 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Add1Q9QYC0 735 aaKnown RBP12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 BC051142Q3V0M8 400 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Adam2Q60718 735 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tssk1bQ61241 365 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ttc39bQ8BYY4 617 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Btbd7Q8CFE5 1130 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Dppa3Q8QZY3 150 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ppp6r2Q8R3Q2 923 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mdc1Q5PSV9 1707 aa12.43□□□□□ -0.42
Trim56-201ENSMUST00000054384 Myh3P13541 1940 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Olfr726E9Q8X3 321 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mfsd4b4J3QNS5 503 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Olfr725Q05A45 321 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Adck2Q6NSR3 617 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tmem270Q6UJB9 264 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Smarcal1Q8BJL0 910 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Strip1Q8C079 837 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Abcf3Q8K268 709 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Golph3lQ8R088 285 aaKnown RBP12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Olfr474Q8VFC9 310 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gpr63Q9EQQ3 425 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nid2O88322 1403 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Kiaa0232Q80U59 1396 aaKnown RBP12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 AfmO89020 608 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Usp7Q6A4J8 1103 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Fam196bQ6GQV1 535 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nudt16Q6P3D0 195 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 MbipQ99LQ1 341 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Eya4Q9Z191 616 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 PrkcbP68404 671 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tbx1P70323 479 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 WlsQ6DID7 541 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Olfr1467Q8VFW1 308 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nudt12Q9DCN1 462 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Zscan4-ps3A0A1B0GRH6 506 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Zscan4-ps2A0A1C7CYU6 506 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Deup1Q7M6Y5 601 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 CenpsQ9D084 142 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 S100pbpQ9D5K4 396 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms