RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Syn2Q64332 586 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Frmd4aQ8BIE6 1020 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tph2Q8CGV2 488 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Kdm1bQ8CIG3 826 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Stard7Q8R1R3 373 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Defb15Q8R2I5 79 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Uroc1Q8VC12 676 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rpn1Q91YQ5 608 aaKnown RBP20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Riok3Q9DBU3 519 aaKnown RBP20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Olig1Q9JKN5 260 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Slc26a3Q9WVC8 757 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Sucla2Q9Z2I9 463 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 PatjQ63ZW7 1834 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Mical3Q8CJ19 1993 aa20.06■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Prdm12A2AJ77 365 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Lrrc63A6H694 637 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Vti1aO89116 217 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ppm1jQ149T7 507 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tom1l2Q5SRX1 507 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Orc2Q60862 576 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Mea1Q64327 174 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tdpoz2Q717B2 364 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Arhgap24Q8C4V1 747 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Gpc5Q8CAL5 572 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Acot11Q8VHQ9 594 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ptdss1Q99LH2 473 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Subh2bvQ9D9Z7 123 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 1700013H16RikQ9DAC5 291 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Klf15Q9EPW2 415 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rdh14Q9ERI6 334 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ddx24Q9ESV0 857 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 PygmQ9WUB3 842 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Krt27Q9Z320 448 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Slc8a3S4R2P9 928 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 B020011L13RikA0A087WQI7 412 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ccdc13D3YV10 709 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Fam47eD3YWC7 402 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 AfmO89020 608 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Kif5aP33175 1027 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ccng1P51945 294 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 InscQ3HNM7 579 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Adamts18Q4VC17 1219 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Nuak1Q641K5 658 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 NemfQ8CCP0 1064 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Gnl3Q8CI11 538 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tdrd1Q99MV1 1172 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rex1bdQ9CYZ6 169 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 PrccQ9EQC8 491 aaKnown RBP20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Stk32bQ9JJX8 414 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Diaph3Q9Z207 1171 aa20.05■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Plekhg4A0A1L1SU27 1217 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Prss51A0A286YDY8 319 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rps12P63323 132 aaKnown RBP20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Rcsd1Q3UZA1 412 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Cyp3a11Q64459 504 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Daam1Q8BPM0 1077 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tmem145Q8C4U2 746 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Pcdha2Q91Y17 948 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 GrapQ9CX99 217 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Smchd1Q6P5D8 2007 aaKnown RBP20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Zfp94E9Q6Y4 486 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ythdf1P59326 559 aaKnown RBP20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Arl4cP61208 192 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Serping1P97290 504 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Yipf3Q3UDR8 347 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Capn13Q3UW68 665 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Znf579Q80VM4 562 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ddhd1Q80YA3 547 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 6820408C15RikQ8BJX2 354 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Kbtbd13Q8C828 458 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Tdrd12Q9CWU0 1215 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 IydQ9DCX8 285 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ccdc22Q9JIG7 627 aa20.04■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 NinQ61043 2035 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Atp9aO70228 1047 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Axin2O88566 840 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 NcstnP57716 708 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Uhmk1P97343 419 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Znf112Q0VAW7 879 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Togaram2Q3TYG6 1002 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Camta2Q80Y50 1208 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Elmo3Q8BYZ7 720 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Arhgap18Q8K0Q5 663 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Pde6cQ91ZQ1 861 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Cst12Q9DAN8 128 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Prmt2Q9R144 448 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Sgk1Q9WVC6 431 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Gbp2Q9Z0E6 589 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Arih1Q9Z1K5 555 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Robo3Q9Z2I4 1366 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Sbf2E9PXF8 1872 aa20.03■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ppargc1aO70343 797 aa20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Icam1P13597 537 aaKnown RBP20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 PdgfaP20033 211 aa20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Ptk2P34152 1090 aa20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Crnkl1P63154 690 aaKnown RBP20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Sp4Q62445 782 aa20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Lsm8Q6ZWM4 96 aaKnown RBP20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 Eif2aQ8BJW6 581 aaKnown RBP20.02■□□□□ 0.8
Ccdc50-201ENSMUST00000039443 BoraQ8BS90 525 aa20.02■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms